Protein–RNA interactions for Protein: Q62559

Ift52, Intraflagellar transport protein 52 homolog, mousemouse

Predictions only

Length 426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift52Q62559 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ift52Q62559 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ift52Q62559 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ift52Q62559 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ift52Q62559 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ift52Q62559 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ift52Q62559 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ift52Q62559 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ift52Q62559 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
Ift52Q62559 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ift52Q62559 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ift52Q62559 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ift52Q62559 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ift52Q62559 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ift52Q62559 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ift52Q62559 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ift52Q62559 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ift52Q62559 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ift52Q62559 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ift52Q62559 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ift52Q62559 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift52Q62559 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.19■□□□□ 0.34
Ift52Q62559 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.19■□□□□ 0.34
Ift52Q62559 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ift52Q62559 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Ift52Q62559 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ift52Q62559 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ift52Q62559 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Ift52Q62559 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift52Q62559 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift52Q62559 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.19■□□□□ 0.34
Ift52Q62559 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ift52Q62559 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ift52Q62559 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift52Q62559 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Ift52Q62559 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift52Q62559 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ift52Q62559 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ift52Q62559 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ift52Q62559 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.19■□□□□ 0.34
Ift52Q62559 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ift52Q62559 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Ift52Q62559 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ift52Q62559 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ift52Q62559 Gm10418-201ENSMUST00000100943 576 ntBASIC17.18■□□□□ 0.34
Ift52Q62559 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.18■□□□□ 0.34
Ift52Q62559 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.18■□□□□ 0.34
Ift52Q62559 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.18■□□□□ 0.34
Ift52Q62559 Mir2861-201ENSMUST00000175539 82 ntBASIC17.18■□□□□ 0.34
Ift52Q62559 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.18■□□□□ 0.34
Ift52Q62559 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ift52Q62559 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ift52Q62559 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ift52Q62559 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ift52Q62559 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ift52Q62559 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.18■□□□□ 0.34
Ift52Q62559 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ift52Q62559 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ift52Q62559 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift52Q62559 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift52Q62559 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift52Q62559 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.17■□□□□ 0.34
Ift52Q62559 Gm37292-201ENSMUST00000192062 758 ntBASIC17.17■□□□□ 0.34
Ift52Q62559 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Ift52Q62559 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.17■□□□□ 0.34
Ift52Q62559 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ift52Q62559 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ift52Q62559 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ift52Q62559 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift52Q62559 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift52Q62559 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.16■□□□□ 0.34
Ift52Q62559 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ift52Q62559 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift52Q62559 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift52Q62559 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.16■□□□□ 0.34
Ift52Q62559 Gm715-201ENSMUST00000117865 831 ntBASIC17.16■□□□□ 0.34
Ift52Q62559 Gm11643-201ENSMUST00000119578 864 ntBASIC17.16■□□□□ 0.34
Ift52Q62559 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift52Q62559 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.16■□□□□ 0.34
Ift52Q62559 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift52Q62559 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift52Q62559 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift52Q62559 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift52Q62559 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ift52Q62559 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.15■□□□□ 0.34
Ift52Q62559 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ift52Q62559 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ift52Q62559 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ift52Q62559 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ift52Q62559 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ift52Q62559 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.15■□□□□ 0.34
Ift52Q62559 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.15■□□□□ 0.34
Ift52Q62559 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ift52Q62559 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ift52Q62559 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ift52Q62559 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
Ift52Q62559 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ift52Q62559 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.14■□□□□ 0.33
Ift52Q62559 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ift52Q62559 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms