Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AtmQ62388 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AtmQ62388 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AtmQ62388 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
AtmQ62388 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
AtmQ62388 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AtmQ62388 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.9■□□□□ 0.3
AtmQ62388 Gm27357-201ENSMUST00000183754 135 ntBASIC16.9■□□□□ 0.3
AtmQ62388 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AtmQ62388 Gm10566-201ENSMUST00000086739 996 ntBASIC16.9■□□□□ 0.3
AtmQ62388 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
AtmQ62388 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AtmQ62388 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AtmQ62388 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AtmQ62388 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.9■□□□□ 0.3
AtmQ62388 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.9■□□□□ 0.3
AtmQ62388 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.9■□□□□ 0.3
AtmQ62388 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
AtmQ62388 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AtmQ62388 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
AtmQ62388 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AtmQ62388 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AtmQ62388 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AtmQ62388 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AtmQ62388 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.89■□□□□ 0.29
AtmQ62388 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AtmQ62388 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
AtmQ62388 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.89■□□□□ 0.29
AtmQ62388 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
AtmQ62388 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
AtmQ62388 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AtmQ62388 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AtmQ62388 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AtmQ62388 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AtmQ62388 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AtmQ62388 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AtmQ62388 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.88■□□□□ 0.29
AtmQ62388 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AtmQ62388 Gm13474-201ENSMUST00000122466 815 ntBASIC16.88■□□□□ 0.29
AtmQ62388 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.88■□□□□ 0.29
AtmQ62388 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AtmQ62388 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.88■□□□□ 0.29
AtmQ62388 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AtmQ62388 Gm28659-201ENSMUST00000188013 759 ntBASIC16.88■□□□□ 0.29
AtmQ62388 Gm18206-201ENSMUST00000207027 926 ntBASIC16.88■□□□□ 0.29
AtmQ62388 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AtmQ62388 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.88■□□□□ 0.29
AtmQ62388 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AtmQ62388 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
AtmQ62388 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.88■□□□□ 0.29
AtmQ62388 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AtmQ62388 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AtmQ62388 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AtmQ62388 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AtmQ62388 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
AtmQ62388 Gm27389-201ENSMUST00000183622 195 ntBASIC16.87■□□□□ 0.29
AtmQ62388 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.87■□□□□ 0.29
AtmQ62388 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AtmQ62388 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AtmQ62388 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AtmQ62388 Gm11950-201ENSMUST00000121615 838 ntBASIC16.86■□□□□ 0.29
AtmQ62388 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
AtmQ62388 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
AtmQ62388 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
AtmQ62388 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.86■□□□□ 0.29
AtmQ62388 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AtmQ62388 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.86■□□□□ 0.29
AtmQ62388 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AtmQ62388 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AtmQ62388 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.86■□□□□ 0.29
AtmQ62388 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AtmQ62388 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
AtmQ62388 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.86■□□□□ 0.29
AtmQ62388 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.86■□□□□ 0.29
AtmQ62388 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
AtmQ62388 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AtmQ62388 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AtmQ62388 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AtmQ62388 Fst-202ENSMUST00000223640 2612 ntBASIC16.86■□□□□ 0.29
AtmQ62388 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
AtmQ62388 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AtmQ62388 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AtmQ62388 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AtmQ62388 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms