Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six2Q62232 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.03■□□□□ 0.64
Six2Q62232 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six2Q62232 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six2Q62232 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six2Q62232 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Six2Q62232 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Six2Q62232 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Six2Q62232 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Six2Q62232 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six2Q62232 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.02■□□□□ 0.64
Six2Q62232 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six2Q62232 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Six2Q62232 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Six2Q62232 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Six2Q62232 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Six2Q62232 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six2Q62232 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six2Q62232 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.01■□□□□ 0.63
Six2Q62232 Gm2559-201ENSMUST00000201323 363 ntBASIC19.01■□□□□ 0.63
Six2Q62232 Gm29791-202ENSMUST00000207888 369 ntBASIC19.01■□□□□ 0.63
Six2Q62232 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Six2Q62232 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Six2Q62232 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six2Q62232 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six2Q62232 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six2Q62232 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six2Q62232 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19■□□□□ 0.63
Six2Q62232 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19■□□□□ 0.63
Six2Q62232 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six2Q62232 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six2Q62232 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six2Q62232 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six2Q62232 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six2Q62232 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six2Q62232 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Six2Q62232 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six2Q62232 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Six2Q62232 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six2Q62232 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Six2Q62232 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six2Q62232 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Six2Q62232 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.99■□□□□ 0.63
Six2Q62232 Gm11249-201ENSMUST00000117071 859 ntBASIC18.99■□□□□ 0.63
Six2Q62232 Gm12896-201ENSMUST00000118430 226 ntBASIC18.99■□□□□ 0.63
Six2Q62232 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Six2Q62232 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six2Q62232 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Six2Q62232 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six2Q62232 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Six2Q62232 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six2Q62232 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six2Q62232 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.99■□□□□ 0.63
Six2Q62232 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six2Q62232 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Six2Q62232 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.98■□□□□ 0.63
Six2Q62232 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six2Q62232 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.98■□□□□ 0.63
Six2Q62232 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.98■□□□□ 0.63
Six2Q62232 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six2Q62232 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.98■□□□□ 0.63
Six2Q62232 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six2Q62232 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Six2Q62232 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six2Q62232 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six2Q62232 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six2Q62232 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six2Q62232 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six2Q62232 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six2Q62232 Mir8112-201ENSMUST00000184382 131 ntBASIC18.97■□□□□ 0.63
Six2Q62232 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.97■□□□□ 0.63
Six2Q62232 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six2Q62232 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six2Q62232 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six2Q62232 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six2Q62232 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Six2Q62232 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six2Q62232 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six2Q62232 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six2Q62232 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six2Q62232 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six2Q62232 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six2Q62232 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.96■□□□□ 0.63
Six2Q62232 Gm13401-201ENSMUST00000117074 291 ntBASIC18.96■□□□□ 0.63
Six2Q62232 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.96■□□□□ 0.63
Six2Q62232 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six2Q62232 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.96■□□□□ 0.63
Six2Q62232 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Six2Q62232 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six2Q62232 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Six2Q62232 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six2Q62232 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six2Q62232 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Six2Q62232 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six2Q62232 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six2Q62232 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Six2Q62232 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six2Q62232 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six2Q62232 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six2Q62232 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms