Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Six1Q62231 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Six1Q62231 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six1Q62231 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six1Q62231 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six1Q62231 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six1Q62231 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Six1Q62231 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.3■□□□□ 0.52
Six1Q62231 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six1Q62231 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Six1Q62231 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.29■□□□□ 0.52
Six1Q62231 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Six1Q62231 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six1Q62231 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six1Q62231 Gm6211-202ENSMUST00000167849 925 ntBASIC18.29■□□□□ 0.52
Six1Q62231 Mir8112-201ENSMUST00000184382 131 ntBASIC18.29■□□□□ 0.52
Six1Q62231 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Six1Q62231 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six1Q62231 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six1Q62231 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Six1Q62231 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Six1Q62231 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.29■□□□□ 0.52
Six1Q62231 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.28■□□□□ 0.52
Six1Q62231 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six1Q62231 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six1Q62231 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six1Q62231 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Six1Q62231 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Six1Q62231 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six1Q62231 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Six1Q62231 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.28■□□□□ 0.52
Six1Q62231 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six1Q62231 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Six1Q62231 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six1Q62231 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six1Q62231 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Six1Q62231 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.28■□□□□ 0.52
Six1Q62231 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Six1Q62231 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Six1Q62231 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six1Q62231 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six1Q62231 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.28■□□□□ 0.52
Six1Q62231 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six1Q62231 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Six1Q62231 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Six1Q62231 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.27■□□□□ 0.52
Six1Q62231 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six1Q62231 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Six1Q62231 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Six1Q62231 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Six1Q62231 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.27■□□□□ 0.52
Six1Q62231 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six1Q62231 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six1Q62231 Zfp783-201ENSMUST00000095946 670 ntBASIC18.27■□□□□ 0.52
Six1Q62231 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six1Q62231 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six1Q62231 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Six1Q62231 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.26■□□□□ 0.51
Six1Q62231 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.26■□□□□ 0.51
Six1Q62231 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.26■□□□□ 0.51
Six1Q62231 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 Gm2399-201ENSMUST00000104944 225 ntBASIC18.26■□□□□ 0.51
Six1Q62231 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Six1Q62231 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Six1Q62231 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six1Q62231 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.25■□□□□ 0.51
Six1Q62231 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six1Q62231 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six1Q62231 Gm7290-201ENSMUST00000104990 617 ntBASIC18.25■□□□□ 0.51
Six1Q62231 Gm13148-201ENSMUST00000118892 745 ntBASIC18.25■□□□□ 0.51
Six1Q62231 Gm12918-201ENSMUST00000120234 636 ntBASIC18.25■□□□□ 0.51
Six1Q62231 Gm15710-201ENSMUST00000121821 636 ntBASIC18.25■□□□□ 0.51
Six1Q62231 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.25■□□□□ 0.51
Six1Q62231 Gm5075-201ENSMUST00000196916 622 ntBASIC18.25■□□□□ 0.51
Six1Q62231 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Six1Q62231 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Six1Q62231 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.25■□□□□ 0.51
Six1Q62231 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.25■□□□□ 0.51
Six1Q62231 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.25■□□□□ 0.51
Six1Q62231 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.25■□□□□ 0.51
Six1Q62231 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six1Q62231 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six1Q62231 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Six1Q62231 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six1Q62231 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms