Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn9aQ62205 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn9aQ62205 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn9aQ62205 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Scn9aQ62205 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn9aQ62205 Gm11950-201ENSMUST00000121615 838 ntBASIC21.1■□□□□ 0.97
Scn9aQ62205 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.1■□□□□ 0.97
Scn9aQ62205 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scn9aQ62205 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.1■□□□□ 0.97
Scn9aQ62205 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn9aQ62205 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn9aQ62205 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn9aQ62205 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn9aQ62205 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn9aQ62205 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC21.09■□□□□ 0.97
Scn9aQ62205 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn9aQ62205 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn9aQ62205 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn9aQ62205 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn9aQ62205 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.09■□□□□ 0.97
Scn9aQ62205 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn9aQ62205 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn9aQ62205 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn9aQ62205 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.08■□□□□ 0.97
Scn9aQ62205 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.08■□□□□ 0.97
Scn9aQ62205 Gm18115-201ENSMUST00000221209 621 ntBASIC21.08■□□□□ 0.97
Scn9aQ62205 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn9aQ62205 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Scn9aQ62205 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn9aQ62205 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21.08■□□□□ 0.96
Scn9aQ62205 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Scn9aQ62205 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Scn9aQ62205 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn9aQ62205 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn9aQ62205 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn9aQ62205 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Scn9aQ62205 Gm25925-201ENSMUST00000158314 306 ntBASIC21.07■□□□□ 0.96
Scn9aQ62205 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.07■□□□□ 0.96
Scn9aQ62205 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Scn9aQ62205 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn9aQ62205 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn9aQ62205 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Scn9aQ62205 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn9aQ62205 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn9aQ62205 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.06■□□□□ 0.96
Scn9aQ62205 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Scn9aQ62205 Gm18958-201ENSMUST00000174258 762 ntBASIC21.06■□□□□ 0.96
Scn9aQ62205 Gm34391-201ENSMUST00000203706 907 ntBASIC21.06■□□□□ 0.96
Scn9aQ62205 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scn9aQ62205 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn9aQ62205 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Scn9aQ62205 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn9aQ62205 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scn9aQ62205 Gm24841-201ENSMUST00000158676 357 ntBASIC21.06■□□□□ 0.96
Scn9aQ62205 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.06■□□□□ 0.96
Scn9aQ62205 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Scn9aQ62205 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC21.06■□□□□ 0.96
Scn9aQ62205 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn9aQ62205 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.06■□□□□ 0.96
Scn9aQ62205 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn9aQ62205 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn9aQ62205 Gm24589-201ENSMUST00000116692 94 ntBASIC21.05■□□□□ 0.96
Scn9aQ62205 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Scn9aQ62205 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn9aQ62205 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn9aQ62205 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scn9aQ62205 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn9aQ62205 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn9aQ62205 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn9aQ62205 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scn9aQ62205 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn9aQ62205 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scn9aQ62205 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn9aQ62205 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn9aQ62205 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC21.04■□□□□ 0.96
Scn9aQ62205 Gm7213-201ENSMUST00000215977 950 ntBASIC21.04■□□□□ 0.96
Scn9aQ62205 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn9aQ62205 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Scn9aQ62205 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn9aQ62205 Gm11355-201ENSMUST00000121120 306 ntBASIC21.03■□□□□ 0.96
Scn9aQ62205 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.03■□□□□ 0.96
Scn9aQ62205 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn9aQ62205 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn9aQ62205 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn9aQ62205 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn9aQ62205 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn9aQ62205 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn9aQ62205 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn9aQ62205 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Scn9aQ62205 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn9aQ62205 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.03■□□□□ 0.96
Scn9aQ62205 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.03■□□□□ 0.96
Scn9aQ62205 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn9aQ62205 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn9aQ62205 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn9aQ62205 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn9aQ62205 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn9aQ62205 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn9aQ62205 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn9aQ62205 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms