Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxc1Q61572 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Foxc1Q61572 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxc1Q61572 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxc1Q61572 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxc1Q61572 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.06□□□□□ -0.32
Foxc1Q61572 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxc1Q61572 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxc1Q61572 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Foxc1Q61572 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Foxc1Q61572 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Foxc1Q61572 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Foxc1Q61572 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.05□□□□□ -0.32
Foxc1Q61572 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxc1Q61572 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxc1Q61572 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxc1Q61572 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxc1Q61572 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.05□□□□□ -0.32
Foxc1Q61572 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.05□□□□□ -0.32
Foxc1Q61572 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
Foxc1Q61572 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxc1Q61572 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.05□□□□□ -0.32
Foxc1Q61572 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxc1Q61572 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.05□□□□□ -0.32
Foxc1Q61572 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.05□□□□□ -0.32
Foxc1Q61572 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Foxc1Q61572 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxc1Q61572 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.05□□□□□ -0.32
Foxc1Q61572 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxc1Q61572 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxc1Q61572 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxc1Q61572 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.05□□□□□ -0.32
Foxc1Q61572 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Foxc1Q61572 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Foxc1Q61572 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Foxc1Q61572 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.04□□□□□ -0.32
Foxc1Q61572 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Foxc1Q61572 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Foxc1Q61572 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Foxc1Q61572 Gm22325-201ENSMUST00000158904 308 ntBASIC13.04□□□□□ -0.32
Foxc1Q61572 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.04□□□□□ -0.32
Foxc1Q61572 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Foxc1Q61572 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Foxc1Q61572 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.03□□□□□ -0.32
Foxc1Q61572 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.03□□□□□ -0.32
Foxc1Q61572 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.03□□□□□ -0.32
Foxc1Q61572 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.03□□□□□ -0.32
Foxc1Q61572 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Foxc1Q61572 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Foxc1Q61572 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Foxc1Q61572 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Foxc1Q61572 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxc1Q61572 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxc1Q61572 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Foxc1Q61572 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxc1Q61572 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Foxc1Q61572 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms