Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.75■□□□□ 0.27
Sox17Q61473 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox17Q61473 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox17Q61473 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox17Q61473 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox17Q61473 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox17Q61473 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Sox17Q61473 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.74■□□□□ 0.27
Sox17Q61473 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.74■□□□□ 0.27
Sox17Q61473 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.74■□□□□ 0.27
Sox17Q61473 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.74■□□□□ 0.27
Sox17Q61473 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Sox17Q61473 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox17Q61473 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.73■□□□□ 0.27
Sox17Q61473 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox17Q61473 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.73■□□□□ 0.27
Sox17Q61473 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox17Q61473 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox17Q61473 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox17Q61473 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox17Q61473 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sox17Q61473 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox17Q61473 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox17Q61473 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox17Q61473 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox17Q61473 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sox17Q61473 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox17Q61473 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox17Q61473 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.73■□□□□ 0.27
Sox17Q61473 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox17Q61473 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox17Q61473 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox17Q61473 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.73■□□□□ 0.27
Sox17Q61473 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox17Q61473 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Sox17Q61473 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox17Q61473 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sox17Q61473 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox17Q61473 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox17Q61473 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.72■□□□□ 0.27
Sox17Q61473 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox17Q61473 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox17Q61473 Idnk-204ENSMUST00000226010 1898 ntBASIC16.72■□□□□ 0.27
Sox17Q61473 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox17Q61473 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox17Q61473 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.72■□□□□ 0.27
Sox17Q61473 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
Sox17Q61473 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox17Q61473 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox17Q61473 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox17Q61473 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Sox17Q61473 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox17Q61473 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox17Q61473 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox17Q61473 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox17Q61473 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox17Q61473 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox17Q61473 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox17Q61473 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox17Q61473 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox17Q61473 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox17Q61473 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.71■□□□□ 0.27
Sox17Q61473 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox17Q61473 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox17Q61473 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox17Q61473 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox17Q61473 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox17Q61473 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox17Q61473 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.71■□□□□ 0.27
Sox17Q61473 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.7■□□□□ 0.26
Sox17Q61473 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox17Q61473 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox17Q61473 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox17Q61473 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sox17Q61473 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox17Q61473 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox17Q61473 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox17Q61473 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Sox17Q61473 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.7■□□□□ 0.26
Sox17Q61473 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox17Q61473 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Sox17Q61473 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox17Q61473 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms