Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scnn1aQ61180 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.55■□□□□ 0.88
Scnn1aQ61180 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scnn1aQ61180 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scnn1aQ61180 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.55■□□□□ 0.88
Scnn1aQ61180 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scnn1aQ61180 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.55■□□□□ 0.88
Scnn1aQ61180 Gm27463-201ENSMUST00000183569 57 ntBASIC20.55■□□□□ 0.88
Scnn1aQ61180 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.55■□□□□ 0.88
Scnn1aQ61180 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.55■□□□□ 0.88
Scnn1aQ61180 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scnn1aQ61180 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scnn1aQ61180 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scnn1aQ61180 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scnn1aQ61180 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scnn1aQ61180 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scnn1aQ61180 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scnn1aQ61180 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scnn1aQ61180 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Scnn1aQ61180 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scnn1aQ61180 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.54■□□□□ 0.88
Scnn1aQ61180 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scnn1aQ61180 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.54■□□□□ 0.88
Scnn1aQ61180 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scnn1aQ61180 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scnn1aQ61180 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scnn1aQ61180 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scnn1aQ61180 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scnn1aQ61180 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Scnn1aQ61180 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scnn1aQ61180 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scnn1aQ61180 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scnn1aQ61180 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scnn1aQ61180 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Scnn1aQ61180 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scnn1aQ61180 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scnn1aQ61180 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scnn1aQ61180 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scnn1aQ61180 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scnn1aQ61180 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.53■□□□□ 0.88
Scnn1aQ61180 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.53■□□□□ 0.88
Scnn1aQ61180 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scnn1aQ61180 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scnn1aQ61180 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scnn1aQ61180 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scnn1aQ61180 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scnn1aQ61180 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.53■□□□□ 0.88
Scnn1aQ61180 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Scnn1aQ61180 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scnn1aQ61180 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scnn1aQ61180 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scnn1aQ61180 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scnn1aQ61180 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scnn1aQ61180 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scnn1aQ61180 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scnn1aQ61180 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Scnn1aQ61180 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scnn1aQ61180 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scnn1aQ61180 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scnn1aQ61180 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scnn1aQ61180 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Scnn1aQ61180 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.51■□□□□ 0.87
Scnn1aQ61180 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.51■□□□□ 0.87
Scnn1aQ61180 Gm24841-201ENSMUST00000158676 357 ntBASIC20.51■□□□□ 0.87
Scnn1aQ61180 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scnn1aQ61180 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scnn1aQ61180 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scnn1aQ61180 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scnn1aQ61180 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scnn1aQ61180 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Scnn1aQ61180 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scnn1aQ61180 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scnn1aQ61180 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scnn1aQ61180 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Scnn1aQ61180 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scnn1aQ61180 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scnn1aQ61180 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scnn1aQ61180 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scnn1aQ61180 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scnn1aQ61180 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scnn1aQ61180 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Scnn1aQ61180 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scnn1aQ61180 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scnn1aQ61180 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scnn1aQ61180 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scnn1aQ61180 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scnn1aQ61180 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scnn1aQ61180 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scnn1aQ61180 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scnn1aQ61180 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.49■□□□□ 0.87
Scnn1aQ61180 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.49■□□□□ 0.87
Scnn1aQ61180 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Scnn1aQ61180 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scnn1aQ61180 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.49■□□□□ 0.87
Scnn1aQ61180 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scnn1aQ61180 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scnn1aQ61180 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scnn1aQ61180 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Scnn1aQ61180 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Scnn1aQ61180 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms