Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm37025-201ENSMUST00000195159 829 ntBASIC25.86■■□□□ 1.73
Ptch1Q61115 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC25.86■■□□□ 1.73
Ptch1Q61115 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Ptch1Q61115 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Ptch1Q61115 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Ptch1Q61115 Actl10-202ENSMUST00000226583 1501 ntBASIC25.85■■□□□ 1.73
Ptch1Q61115 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Ptch1Q61115 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Ptch1Q61115 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC25.85■■□□□ 1.73
Ptch1Q61115 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ptch1Q61115 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Ptch1Q61115 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ptch1Q61115 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ptch1Q61115 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ptch1Q61115 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ptch1Q61115 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
Ptch1Q61115 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC25.84■■□□□ 1.73
Ptch1Q61115 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ptch1Q61115 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ptch1Q61115 Gm38308-201ENSMUST00000194934 1809 ntBASIC25.84■■□□□ 1.73
Ptch1Q61115 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ptch1Q61115 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ptch1Q61115 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
Ptch1Q61115 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
Ptch1Q61115 Mir8098-201ENSMUST00000184011 137 ntBASIC25.83■■□□□ 1.73
Ptch1Q61115 Gm5864-201ENSMUST00000202263 970 ntBASIC25.83■■□□□ 1.73
Ptch1Q61115 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC25.83■■□□□ 1.73
Ptch1Q61115 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ptch1Q61115 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ptch1Q61115 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Ptch1Q61115 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ptch1Q61115 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ptch1Q61115 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ptch1Q61115 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ptch1Q61115 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ptch1Q61115 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Ptch1Q61115 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Ptch1Q61115 Gm10418-201ENSMUST00000100943 576 ntBASIC25.8■■□□□ 1.72
Ptch1Q61115 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Ptch1Q61115 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC25.8■■□□□ 1.72
Ptch1Q61115 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ptch1Q61115 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ptch1Q61115 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ptch1Q61115 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Ptch1Q61115 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
Ptch1Q61115 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
Ptch1Q61115 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ptch1Q61115 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ptch1Q61115 Gm15794-201ENSMUST00000120182 631 ntBASIC25.79■■□□□ 1.72
Ptch1Q61115 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Ptch1Q61115 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ptch1Q61115 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
Ptch1Q61115 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ptch1Q61115 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Ptch1Q61115 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC25.79■■□□□ 1.72
Ptch1Q61115 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Ptch1Q61115 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ptch1Q61115 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Ptch1Q61115 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Ptch1Q61115 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Ptch1Q61115 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Ptch1Q61115 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ptch1Q61115 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ptch1Q61115 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
Ptch1Q61115 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
Ptch1Q61115 Gm45328-201ENSMUST00000210942 917 ntBASIC25.78■■□□□ 1.72
Ptch1Q61115 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC25.78■■□□□ 1.72
Ptch1Q61115 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ptch1Q61115 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Ptch1Q61115 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ptch1Q61115 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC25.77■■□□□ 1.72
Ptch1Q61115 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ptch1Q61115 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ptch1Q61115 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Ptch1Q61115 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC25.77■■□□□ 1.72
Ptch1Q61115 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Ptch1Q61115 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Ptch1Q61115 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Ptch1Q61115 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Ptch1Q61115 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ptch1Q61115 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ptch1Q61115 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Ptch1Q61115 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ptch1Q61115 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC25.76■■□□□ 1.71
Ptch1Q61115 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC25.76■■□□□ 1.71
Ptch1Q61115 Gm5712-201ENSMUST00000199748 1043 ntBASIC25.76■■□□□ 1.71
Ptch1Q61115 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
Ptch1Q61115 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ptch1Q61115 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ptch1Q61115 Gm45906-201ENSMUST00000208911 1430 ntBASIC25.75■■□□□ 1.71
Ptch1Q61115 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC25.75■■□□□ 1.71
Ptch1Q61115 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ptch1Q61115 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC25.75■■□□□ 1.71
Ptch1Q61115 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC25.75■■□□□ 1.71
Ptch1Q61115 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ptch1Q61115 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ptch1Q61115 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Ptch1Q61115 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Ptch1Q61115 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC25.74■■□□□ 1.71
Ptch1Q61115 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms