Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdf4Q61112 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sdf4Q61112 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdf4Q61112 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdf4Q61112 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdf4Q61112 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sdf4Q61112 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sdf4Q61112 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sdf4Q61112 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sdf4Q61112 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Sdf4Q61112 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdf4Q61112 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sdf4Q61112 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.08■□□□□ 0.48
Sdf4Q61112 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdf4Q61112 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdf4Q61112 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdf4Q61112 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdf4Q61112 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Sdf4Q61112 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdf4Q61112 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sdf4Q61112 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdf4Q61112 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdf4Q61112 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdf4Q61112 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdf4Q61112 Gm20049-201ENSMUST00000219950 730 ntBASIC18.07■□□□□ 0.48
Sdf4Q61112 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.07■□□□□ 0.48
Sdf4Q61112 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdf4Q61112 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdf4Q61112 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.07■□□□□ 0.48
Sdf4Q61112 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdf4Q61112 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdf4Q61112 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdf4Q61112 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Sdf4Q61112 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.06■□□□□ 0.48
Sdf4Q61112 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdf4Q61112 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sdf4Q61112 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdf4Q61112 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sdf4Q61112 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdf4Q61112 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdf4Q61112 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdf4Q61112 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Sdf4Q61112 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.06■□□□□ 0.48
Sdf4Q61112 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sdf4Q61112 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdf4Q61112 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Sdf4Q61112 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.05■□□□□ 0.48
Sdf4Q61112 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdf4Q61112 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdf4Q61112 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdf4Q61112 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sdf4Q61112 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sdf4Q61112 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sdf4Q61112 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.04■□□□□ 0.48
Sdf4Q61112 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sdf4Q61112 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sdf4Q61112 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sdf4Q61112 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sdf4Q61112 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.04■□□□□ 0.48
Sdf4Q61112 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.04■□□□□ 0.48
Sdf4Q61112 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sdf4Q61112 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sdf4Q61112 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.04■□□□□ 0.48
Sdf4Q61112 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sdf4Q61112 Fst-202ENSMUST00000223640 2612 ntBASIC18.03■□□□□ 0.48
Sdf4Q61112 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdf4Q61112 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdf4Q61112 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdf4Q61112 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.03■□□□□ 0.48
Sdf4Q61112 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdf4Q61112 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdf4Q61112 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdf4Q61112 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdf4Q61112 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sdf4Q61112 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.03■□□□□ 0.48
Sdf4Q61112 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdf4Q61112 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdf4Q61112 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.03■□□□□ 0.48
Sdf4Q61112 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdf4Q61112 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdf4Q61112 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sdf4Q61112 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdf4Q61112 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sdf4Q61112 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sdf4Q61112 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Sdf4Q61112 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sdf4Q61112 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.02■□□□□ 0.48
Sdf4Q61112 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sdf4Q61112 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sdf4Q61112 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sdf4Q61112 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sdf4Q61112 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sdf4Q61112 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sdf4Q61112 Gm11249-201ENSMUST00000117071 859 ntBASIC18.02■□□□□ 0.48
Sdf4Q61112 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sdf4Q61112 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.02■□□□□ 0.48
Sdf4Q61112 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sdf4Q61112 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sdf4Q61112 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.02■□□□□ 0.48
Sdf4Q61112 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms