Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Nr1h4Q60641 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17■□□□□ 0.31
Nr1h4Q60641 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Nr1h4Q60641 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h4Q60641 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Nr1h4Q60641 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h4Q60641 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1h4Q60641 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Nr1h4Q60641 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h4Q60641 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h4Q60641 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h4Q60641 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h4Q60641 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h4Q60641 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h4Q60641 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h4Q60641 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.99■□□□□ 0.31
Nr1h4Q60641 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h4Q60641 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h4Q60641 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h4Q60641 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h4Q60641 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.99■□□□□ 0.31
Nr1h4Q60641 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h4Q60641 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1h4Q60641 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.98■□□□□ 0.31
Nr1h4Q60641 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h4Q60641 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h4Q60641 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h4Q60641 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Nr1h4Q60641 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.98■□□□□ 0.31
Nr1h4Q60641 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h4Q60641 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nr1h4Q60641 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h4Q60641 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h4Q60641 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h4Q60641 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h4Q60641 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.98■□□□□ 0.31
Nr1h4Q60641 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h4Q60641 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1h4Q60641 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Nr1h4Q60641 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.97■□□□□ 0.31
Nr1h4Q60641 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.97■□□□□ 0.31
Nr1h4Q60641 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.97■□□□□ 0.31
Nr1h4Q60641 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1h4Q60641 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h4Q60641 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.96■□□□□ 0.31
Nr1h4Q60641 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h4Q60641 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h4Q60641 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h4Q60641 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Nr1h4Q60641 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h4Q60641 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h4Q60641 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h4Q60641 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h4Q60641 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.96■□□□□ 0.31
Nr1h4Q60641 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h4Q60641 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h4Q60641 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h4Q60641 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Nr1h4Q60641 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1h4Q60641 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nr1h4Q60641 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nr1h4Q60641 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Nr1h4Q60641 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1h4Q60641 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Nr1h4Q60641 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Nr1h4Q60641 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms