Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pabpn1lQ5XFR0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pabpn1lQ5XFR0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pabpn1lQ5XFR0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pabpn1lQ5XFR0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pabpn1lQ5XFR0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pabpn1lQ5XFR0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pabpn1lQ5XFR0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pabpn1lQ5XFR0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pabpn1lQ5XFR0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pabpn1lQ5XFR0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pabpn1lQ5XFR0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pabpn1lQ5XFR0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pabpn1lQ5XFR0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pabpn1lQ5XFR0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pabpn1lQ5XFR0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pabpn1lQ5XFR0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.85■□□□□ 0.45
Pabpn1lQ5XFR0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pabpn1lQ5XFR0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.85■□□□□ 0.45
Pabpn1lQ5XFR0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.85■□□□□ 0.45
Pabpn1lQ5XFR0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pabpn1lQ5XFR0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pabpn1lQ5XFR0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pabpn1lQ5XFR0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pabpn1lQ5XFR0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pabpn1lQ5XFR0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pabpn1lQ5XFR0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pabpn1lQ5XFR0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pabpn1lQ5XFR0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Pabpn1lQ5XFR0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pabpn1lQ5XFR0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pabpn1lQ5XFR0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pabpn1lQ5XFR0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pabpn1lQ5XFR0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.84■□□□□ 0.45
Pabpn1lQ5XFR0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pabpn1lQ5XFR0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pabpn1lQ5XFR0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.84■□□□□ 0.45
Pabpn1lQ5XFR0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pabpn1lQ5XFR0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pabpn1lQ5XFR0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pabpn1lQ5XFR0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pabpn1lQ5XFR0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pabpn1lQ5XFR0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pabpn1lQ5XFR0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pabpn1lQ5XFR0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.83■□□□□ 0.45
Pabpn1lQ5XFR0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pabpn1lQ5XFR0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pabpn1lQ5XFR0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pabpn1lQ5XFR0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.44
Pabpn1lQ5XFR0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
Pabpn1lQ5XFR0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pabpn1lQ5XFR0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pabpn1lQ5XFR0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pabpn1lQ5XFR0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pabpn1lQ5XFR0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pabpn1lQ5XFR0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pabpn1lQ5XFR0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pabpn1lQ5XFR0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pabpn1lQ5XFR0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pabpn1lQ5XFR0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pabpn1lQ5XFR0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pabpn1lQ5XFR0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pabpn1lQ5XFR0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pabpn1lQ5XFR0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pabpn1lQ5XFR0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pabpn1lQ5XFR0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pabpn1lQ5XFR0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.81■□□□□ 0.44
Pabpn1lQ5XFR0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pabpn1lQ5XFR0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pabpn1lQ5XFR0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pabpn1lQ5XFR0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pabpn1lQ5XFR0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pabpn1lQ5XFR0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pabpn1lQ5XFR0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pabpn1lQ5XFR0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pabpn1lQ5XFR0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pabpn1lQ5XFR0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pabpn1lQ5XFR0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pabpn1lQ5XFR0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pabpn1lQ5XFR0 Tgds-204ENSMUST00000228543 1594 ntBASIC17.8■□□□□ 0.44
Pabpn1lQ5XFR0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pabpn1lQ5XFR0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Pabpn1lQ5XFR0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms