Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ubr3Q5U430 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ubr3Q5U430 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ubr3Q5U430 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ubr3Q5U430 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ubr3Q5U430 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ubr3Q5U430 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.76■■□□□ 1.07
Ubr3Q5U430 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ubr3Q5U430 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ubr3Q5U430 Gm27742-201ENSMUST00000184667 60 ntBASIC21.76■■□□□ 1.07
Ubr3Q5U430 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ubr3Q5U430 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.76■■□□□ 1.07
Ubr3Q5U430 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ubr3Q5U430 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ubr3Q5U430 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ubr3Q5U430 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
Ubr3Q5U430 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ubr3Q5U430 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ubr3Q5U430 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.75■■□□□ 1.07
Ubr3Q5U430 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ubr3Q5U430 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
Ubr3Q5U430 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Ubr3Q5U430 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Ubr3Q5U430 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ubr3Q5U430 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr3Q5U430 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr3Q5U430 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.74■■□□□ 1.07
Ubr3Q5U430 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr3Q5U430 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
Ubr3Q5U430 Olfr129-201ENSMUST00000122318 993 ntBASIC21.74■■□□□ 1.07
Ubr3Q5U430 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr3Q5U430 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr3Q5U430 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr3Q5U430 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr3Q5U430 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr3Q5U430 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr3Q5U430 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr3Q5U430 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
Ubr3Q5U430 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr3Q5U430 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr3Q5U430 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr3Q5U430 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr3Q5U430 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr3Q5U430 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr3Q5U430 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr3Q5U430 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ubr3Q5U430 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr3Q5U430 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ubr3Q5U430 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr3Q5U430 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ubr3Q5U430 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.73■■□□□ 1.07
Ubr3Q5U430 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.73■■□□□ 1.07
Ubr3Q5U430 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr3Q5U430 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr3Q5U430 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr3Q5U430 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ubr3Q5U430 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ubr3Q5U430 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ubr3Q5U430 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ubr3Q5U430 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.72■■□□□ 1.07
Ubr3Q5U430 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ubr3Q5U430 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ubr3Q5U430 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ubr3Q5U430 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr3Q5U430 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.71■■□□□ 1.07
Ubr3Q5U430 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.71■■□□□ 1.07
Ubr3Q5U430 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr3Q5U430 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC21.71■■□□□ 1.07
Ubr3Q5U430 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.71■■□□□ 1.07
Ubr3Q5U430 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr3Q5U430 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr3Q5U430 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr3Q5U430 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr3Q5U430 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr3Q5U430 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Ubr3Q5U430 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
Ubr3Q5U430 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
Ubr3Q5U430 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
Ubr3Q5U430 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr3Q5U430 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ubr3Q5U430 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Ubr3Q5U430 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr3Q5U430 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr3Q5U430 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr3Q5U430 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr3Q5U430 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.7■■□□□ 1.06
Ubr3Q5U430 Gm26039-201ENSMUST00000158152 144 ntBASIC21.7■■□□□ 1.06
Ubr3Q5U430 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC21.7■■□□□ 1.06
Ubr3Q5U430 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr3Q5U430 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Ubr3Q5U430 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr3Q5U430 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr3Q5U430 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr3Q5U430 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr3Q5U430 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ubr3Q5U430 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr3Q5U430 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr3Q5U430 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr3Q5U430 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr3Q5U430 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms