Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.6□□□□□ -0.07
Trav8d-1Q5R1H8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Gm42778-201ENSMUST00000199644 553 ntBASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-1Q5R1H8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav8d-1Q5R1H8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav8d-1Q5R1H8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav8d-1Q5R1H8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav8d-1Q5R1H8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Trav8d-1Q5R1H8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav8d-1Q5R1H8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-1Q5R1H8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-1Q5R1H8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Gm9988-201ENSMUST00000069786 435 ntBASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav8d-1Q5R1H8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms