Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf43Q5NCP0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rnf43Q5NCP0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 Gm12085-201ENSMUST00000119263 940 ntBASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf43Q5NCP0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 Mir5130-201ENSMUST00000175160 84 ntBASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 Gm2274-201ENSMUST00000184539 609 ntBASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf43Q5NCP0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf43Q5NCP0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.09■□□□□ 0.49
Rnf43Q5NCP0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf43Q5NCP0 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.09■□□□□ 0.49
Rnf43Q5NCP0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf43Q5NCP0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf43Q5NCP0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf43Q5NCP0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf43Q5NCP0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf43Q5NCP0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rnf43Q5NCP0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.09■□□□□ 0.49
Rnf43Q5NCP0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Rnf43Q5NCP0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf43Q5NCP0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Rnf43Q5NCP0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf43Q5NCP0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Rnf43Q5NCP0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf43Q5NCP0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf43Q5NCP0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf43Q5NCP0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf43Q5NCP0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf43Q5NCP0 Gm27741-201ENSMUST00000185060 237 ntBASIC18.08■□□□□ 0.48
Rnf43Q5NCP0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.08■□□□□ 0.48
Rnf43Q5NCP0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf43Q5NCP0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf43Q5NCP0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf43Q5NCP0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf43Q5NCP0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf43Q5NCP0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf43Q5NCP0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf43Q5NCP0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.08■□□□□ 0.48
Rnf43Q5NCP0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf43Q5NCP0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.07■□□□□ 0.48
Rnf43Q5NCP0 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.07■□□□□ 0.48
Rnf43Q5NCP0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf43Q5NCP0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf43Q5NCP0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf43Q5NCP0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rnf43Q5NCP0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf43Q5NCP0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms