Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Trim41Q5NCC3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Trim41Q5NCC3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Trim41Q5NCC3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Trim41Q5NCC3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Trim41Q5NCC3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Trim41Q5NCC3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Trim41Q5NCC3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
Trim41Q5NCC3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.54
Trim41Q5NCC3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
Trim41Q5NCC3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Trim41Q5NCC3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Trim41Q5NCC3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Trim41Q5NCC3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Trim41Q5NCC3 Gm12085-201ENSMUST00000119263 940 ntBASIC30.94■■■□□ 2.54
Trim41Q5NCC3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Trim41Q5NCC3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC30.94■■■□□ 2.54
Trim41Q5NCC3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Trim41Q5NCC3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC30.94■■■□□ 2.54
Trim41Q5NCC3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Trim41Q5NCC3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Trim41Q5NCC3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Trim41Q5NCC3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Trim41Q5NCC3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC30.92■■■□□ 2.54
Trim41Q5NCC3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Trim41Q5NCC3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC30.92■■■□□ 2.54
Trim41Q5NCC3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC30.92■■■□□ 2.54
Trim41Q5NCC3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Trim41Q5NCC3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Trim41Q5NCC3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Trim41Q5NCC3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Trim41Q5NCC3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Trim41Q5NCC3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Trim41Q5NCC3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Trim41Q5NCC3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Trim41Q5NCC3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC30.91■■■□□ 2.54
Trim41Q5NCC3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Trim41Q5NCC3 Gm17807-201ENSMUST00000186869 298 ntBASIC30.91■■■□□ 2.54
Trim41Q5NCC3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Trim41Q5NCC3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC30.91■■■□□ 2.54
Trim41Q5NCC3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Trim41Q5NCC3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Trim41Q5NCC3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Trim41Q5NCC3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Trim41Q5NCC3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Trim41Q5NCC3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC30.89■■■□□ 2.54
Trim41Q5NCC3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Trim41Q5NCC3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Trim41Q5NCC3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Trim41Q5NCC3 Gm38027-201ENSMUST00000192315 235 ntBASIC30.89■■■□□ 2.54
Trim41Q5NCC3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
Trim41Q5NCC3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC30.88■■■□□ 2.53
Trim41Q5NCC3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
Trim41Q5NCC3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Trim41Q5NCC3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Trim41Q5NCC3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC30.88■■■□□ 2.53
Trim41Q5NCC3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC30.88■■■□□ 2.53
Trim41Q5NCC3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC30.88■■■□□ 2.53
Trim41Q5NCC3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Trim41Q5NCC3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC30.87■■■□□ 2.53
Trim41Q5NCC3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Trim41Q5NCC3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
Trim41Q5NCC3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
Trim41Q5NCC3 Gm27704-201ENSMUST00000185094 107 ntBASIC30.87■■■□□ 2.53
Trim41Q5NCC3 Gm37935-201ENSMUST00000192012 982 ntBASIC30.87■■■□□ 2.53
Trim41Q5NCC3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
Trim41Q5NCC3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC30.87■■■□□ 2.53
Trim41Q5NCC3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Trim41Q5NCC3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Trim41Q5NCC3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
Trim41Q5NCC3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Trim41Q5NCC3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
Trim41Q5NCC3 Gm4974-201ENSMUST00000209974 875 ntBASIC30.86■■■□□ 2.53
Trim41Q5NCC3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Trim41Q5NCC3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
Trim41Q5NCC3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Trim41Q5NCC3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Trim41Q5NCC3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC30.85■■■□□ 2.53
Trim41Q5NCC3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
Trim41Q5NCC3 Tgds-204ENSMUST00000228543 1594 ntBASIC30.85■■■□□ 2.53
Trim41Q5NCC3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
Trim41Q5NCC3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Trim41Q5NCC3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC30.85■■■□□ 2.53
Trim41Q5NCC3 Gm27463-201ENSMUST00000183569 57 ntBASIC30.85■■■□□ 2.53
Trim41Q5NCC3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC30.85■■■□□ 2.53
Trim41Q5NCC3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Trim41Q5NCC3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Trim41Q5NCC3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
Trim41Q5NCC3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Trim41Q5NCC3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC30.84■■■□□ 2.53
Trim41Q5NCC3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC30.84■■■□□ 2.53
Trim41Q5NCC3 Gm9694-201ENSMUST00000193347 1189 ntBASIC30.84■■■□□ 2.53
Trim41Q5NCC3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Trim41Q5NCC3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Trim41Q5NCC3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Trim41Q5NCC3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Trim41Q5NCC3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Trim41Q5NCC3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC30.83■■■□□ 2.53
Trim41Q5NCC3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC30.83■■■□□ 2.53
Trim41Q5NCC3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms