Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Bdp1Q571C7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.16■□□□□ 0.5
Bdp1Q571C7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Bdp1Q571C7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Bdp1Q571C7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Bdp1Q571C7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Bdp1Q571C7 Gm2213-201ENSMUST00000197485 688 ntBASIC18.15■□□□□ 0.5
Bdp1Q571C7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Bdp1Q571C7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bdp1Q571C7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.15■□□□□ 0.5
Bdp1Q571C7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bdp1Q571C7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Bdp1Q571C7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.15■□□□□ 0.5
Bdp1Q571C7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bdp1Q571C7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Bdp1Q571C7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Bdp1Q571C7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Bdp1Q571C7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
Bdp1Q571C7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
Bdp1Q571C7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Bdp1Q571C7 Gm37722-201ENSMUST00000193757 208 ntBASIC18.14■□□□□ 0.5
Bdp1Q571C7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Bdp1Q571C7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Bdp1Q571C7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bdp1Q571C7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bdp1Q571C7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bdp1Q571C7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bdp1Q571C7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Bdp1Q571C7 Gm12895-201ENSMUST00000122214 226 ntBASIC18.14■□□□□ 0.49
Bdp1Q571C7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.14■□□□□ 0.49
Bdp1Q571C7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Bdp1Q571C7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
Bdp1Q571C7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Bdp1Q571C7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Bdp1Q571C7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bdp1Q571C7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bdp1Q571C7 Mir770-201ENSMUST00000103252 94 ntBASIC18.13■□□□□ 0.49
Bdp1Q571C7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Bdp1Q571C7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bdp1Q571C7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Bdp1Q571C7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bdp1Q571C7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bdp1Q571C7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Bdp1Q571C7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bdp1Q571C7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Bdp1Q571C7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Bdp1Q571C7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.12■□□□□ 0.49
Bdp1Q571C7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Bdp1Q571C7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.12■□□□□ 0.49
Bdp1Q571C7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.12■□□□□ 0.49
Bdp1Q571C7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Bdp1Q571C7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Bdp1Q571C7 Mir5126-201ENSMUST00000175513 77 ntBASIC18.12■□□□□ 0.49
Bdp1Q571C7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
Bdp1Q571C7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Bdp1Q571C7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Bdp1Q571C7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Bdp1Q571C7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.12■□□□□ 0.49
Bdp1Q571C7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Bdp1Q571C7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Bdp1Q571C7 Gm8000-201ENSMUST00000188378 592 ntBASIC18.12■□□□□ 0.49
Bdp1Q571C7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.12■□□□□ 0.49
Bdp1Q571C7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Bdp1Q571C7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.12■□□□□ 0.49
Bdp1Q571C7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.11■□□□□ 0.49
Bdp1Q571C7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Bdp1Q571C7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Bdp1Q571C7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Bdp1Q571C7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Bdp1Q571C7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
Bdp1Q571C7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.11■□□□□ 0.49
Bdp1Q571C7 Gm10052-201ENSMUST00000168019 960 ntBASIC18.11■□□□□ 0.49
Bdp1Q571C7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.11■□□□□ 0.49
Bdp1Q571C7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.11■□□□□ 0.49
Bdp1Q571C7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Bdp1Q571C7 Gm7729-201ENSMUST00000050143 801 ntBASIC18.11■□□□□ 0.49
Bdp1Q571C7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Bdp1Q571C7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Bdp1Q571C7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Bdp1Q571C7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Bdp1Q571C7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Bdp1Q571C7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Bdp1Q571C7 Gm1401-201ENSMUST00000122048 772 ntBASIC18.1■□□□□ 0.49
Bdp1Q571C7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Bdp1Q571C7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.1■□□□□ 0.49
Bdp1Q571C7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Bdp1Q571C7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Bdp1Q571C7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.1■□□□□ 0.49
Bdp1Q571C7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Bdp1Q571C7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.09■□□□□ 0.49
Bdp1Q571C7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Bdp1Q571C7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Bdp1Q571C7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Bdp1Q571C7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Bdp1Q571C7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Bdp1Q571C7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Bdp1Q571C7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Bdp1Q571C7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
Bdp1Q571C7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Bdp1Q571C7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms