Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ddx49Q4FZF3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx49Q4FZF3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx49Q4FZF3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx49Q4FZF3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx49Q4FZF3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.69■□□□□ 0.9
Ddx49Q4FZF3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Ddx49Q4FZF3 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.69■□□□□ 0.9
Ddx49Q4FZF3 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.69■□□□□ 0.9
Ddx49Q4FZF3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx49Q4FZF3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.69■□□□□ 0.9
Ddx49Q4FZF3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Ddx49Q4FZF3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx49Q4FZF3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx49Q4FZF3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx49Q4FZF3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx49Q4FZF3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.68■□□□□ 0.9
Ddx49Q4FZF3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx49Q4FZF3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx49Q4FZF3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx49Q4FZF3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx49Q4FZF3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx49Q4FZF3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx49Q4FZF3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx49Q4FZF3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx49Q4FZF3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ddx49Q4FZF3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Ddx49Q4FZF3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx49Q4FZF3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx49Q4FZF3 Gm7284-201ENSMUST00000131667 944 ntBASIC20.66■□□□□ 0.9
Ddx49Q4FZF3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx49Q4FZF3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx49Q4FZF3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx49Q4FZF3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx49Q4FZF3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx49Q4FZF3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ddx49Q4FZF3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx49Q4FZF3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx49Q4FZF3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx49Q4FZF3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Ddx49Q4FZF3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ddx49Q4FZF3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ddx49Q4FZF3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.65■□□□□ 0.9
Ddx49Q4FZF3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx49Q4FZF3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx49Q4FZF3 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.65■□□□□ 0.9
Ddx49Q4FZF3 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.65■□□□□ 0.9
Ddx49Q4FZF3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.65■□□□□ 0.9
Ddx49Q4FZF3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.65■□□□□ 0.9
Ddx49Q4FZF3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ddx49Q4FZF3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx49Q4FZF3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Ddx49Q4FZF3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx49Q4FZF3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ddx49Q4FZF3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ddx49Q4FZF3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx49Q4FZF3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx49Q4FZF3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx49Q4FZF3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx49Q4FZF3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.64■□□□□ 0.89
Ddx49Q4FZF3 Gm17661-201ENSMUST00000170317 270 ntBASIC20.64■□□□□ 0.89
Ddx49Q4FZF3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.64■□□□□ 0.89
Ddx49Q4FZF3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.64■□□□□ 0.89
Ddx49Q4FZF3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.64■□□□□ 0.89
Ddx49Q4FZF3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx49Q4FZF3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx49Q4FZF3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ddx49Q4FZF3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Ddx49Q4FZF3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx49Q4FZF3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx49Q4FZF3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx49Q4FZF3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx49Q4FZF3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx49Q4FZF3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.63■□□□□ 0.89
Ddx49Q4FZF3 Gm25016-201ENSMUST00000158399 131 ntBASIC20.63■□□□□ 0.89
Ddx49Q4FZF3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms