Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Gm8969-201ENSMUST00000199694 526 ntBASIC20.48■□□□□ 0.87
Ckap2Q3V1H1 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.48■□□□□ 0.87
Ckap2Q3V1H1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap2Q3V1H1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap2Q3V1H1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap2Q3V1H1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap2Q3V1H1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ckap2Q3V1H1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
Ckap2Q3V1H1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ckap2Q3V1H1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ckap2Q3V1H1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ckap2Q3V1H1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ckap2Q3V1H1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ckap2Q3V1H1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ckap2Q3V1H1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ckap2Q3V1H1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ckap2Q3V1H1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ckap2Q3V1H1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ckap2Q3V1H1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ckap2Q3V1H1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ckap2Q3V1H1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ckap2Q3V1H1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ckap2Q3V1H1 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.46■□□□□ 0.87
Ckap2Q3V1H1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.46■□□□□ 0.87
Ckap2Q3V1H1 Gm27011-201ENSMUST00000182352 972 ntBASIC20.46■□□□□ 0.87
Ckap2Q3V1H1 Mir8112-201ENSMUST00000184382 131 ntBASIC20.46■□□□□ 0.87
Ckap2Q3V1H1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ckap2Q3V1H1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Ckap2Q3V1H1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ckap2Q3V1H1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ckap2Q3V1H1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ckap2Q3V1H1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.46■□□□□ 0.87
Ckap2Q3V1H1 Rarb-207ENSMUST00000225921 2756 ntBASIC20.46■□□□□ 0.87
Ckap2Q3V1H1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Ckap2Q3V1H1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ckap2Q3V1H1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ckap2Q3V1H1 Gm10698-201ENSMUST00000182663 604 ntBASIC20.45■□□□□ 0.86
Ckap2Q3V1H1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ckap2Q3V1H1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ckap2Q3V1H1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.45■□□□□ 0.86
Ckap2Q3V1H1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.45■□□□□ 0.86
Ckap2Q3V1H1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ckap2Q3V1H1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ckap2Q3V1H1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ckap2Q3V1H1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ckap2Q3V1H1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ckap2Q3V1H1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ckap2Q3V1H1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ckap2Q3V1H1 Gm37292-201ENSMUST00000192062 758 ntBASIC20.44■□□□□ 0.86
Ckap2Q3V1H1 Gm42545-201ENSMUST00000202755 922 ntBASIC20.44■□□□□ 0.86
Ckap2Q3V1H1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ckap2Q3V1H1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ckap2Q3V1H1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ckap2Q3V1H1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Ckap2Q3V1H1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ckap2Q3V1H1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ckap2Q3V1H1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ckap2Q3V1H1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ckap2Q3V1H1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ckap2Q3V1H1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ckap2Q3V1H1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ckap2Q3V1H1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ckap2Q3V1H1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ckap2Q3V1H1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ckap2Q3V1H1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ckap2Q3V1H1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ckap2Q3V1H1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.43■□□□□ 0.86
Ckap2Q3V1H1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ckap2Q3V1H1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ckap2Q3V1H1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ckap2Q3V1H1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ckap2Q3V1H1 Gm13168-201ENSMUST00000121771 632 ntBASIC20.42■□□□□ 0.86
Ckap2Q3V1H1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.42■□□□□ 0.86
Ckap2Q3V1H1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ckap2Q3V1H1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ckap2Q3V1H1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ckap2Q3V1H1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Ckap2Q3V1H1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ckap2Q3V1H1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ckap2Q3V1H1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ckap2Q3V1H1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.4■□□□□ 0.86
Ckap2Q3V1H1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ckap2Q3V1H1 Gm15378-201ENSMUST00000121894 207 ntBASIC20.4■□□□□ 0.86
Ckap2Q3V1H1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms