Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Trim80Q3V061 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.37■□□□□ 0.53
Trim80Q3V061 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim80Q3V061 Gm27801-201ENSMUST00000184174 223 ntBASIC18.37■□□□□ 0.53
Trim80Q3V061 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim80Q3V061 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim80Q3V061 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim80Q3V061 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim80Q3V061 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim80Q3V061 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim80Q3V061 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim80Q3V061 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim80Q3V061 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim80Q3V061 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim80Q3V061 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim80Q3V061 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim80Q3V061 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim80Q3V061 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim80Q3V061 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim80Q3V061 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim80Q3V061 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim80Q3V061 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim80Q3V061 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.36■□□□□ 0.53
Trim80Q3V061 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim80Q3V061 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.36■□□□□ 0.53
Trim80Q3V061 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim80Q3V061 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim80Q3V061 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim80Q3V061 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim80Q3V061 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Trim80Q3V061 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim80Q3V061 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim80Q3V061 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim80Q3V061 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim80Q3V061 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.35■□□□□ 0.53
Trim80Q3V061 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Trim80Q3V061 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Trim80Q3V061 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim80Q3V061 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim80Q3V061 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim80Q3V061 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim80Q3V061 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim80Q3V061 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim80Q3V061 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim80Q3V061 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim80Q3V061 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim80Q3V061 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trim80Q3V061 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim80Q3V061 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim80Q3V061 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim80Q3V061 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim80Q3V061 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Trim80Q3V061 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim80Q3V061 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim80Q3V061 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim80Q3V061 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim80Q3V061 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim80Q3V061 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim80Q3V061 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim80Q3V061 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim80Q3V061 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim80Q3V061 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim80Q3V061 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim80Q3V061 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trim80Q3V061 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim80Q3V061 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim80Q3V061 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim80Q3V061 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.33■□□□□ 0.53
Trim80Q3V061 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Trim80Q3V061 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.33■□□□□ 0.53
Trim80Q3V061 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim80Q3V061 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim80Q3V061 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim80Q3V061 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Trim80Q3V061 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trim80Q3V061 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim80Q3V061 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Trim80Q3V061 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim80Q3V061 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim80Q3V061 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim80Q3V061 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim80Q3V061 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.32■□□□□ 0.52
Trim80Q3V061 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.32■□□□□ 0.52
Trim80Q3V061 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim80Q3V061 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim80Q3V061 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.32■□□□□ 0.52
Trim80Q3V061 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim80Q3V061 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim80Q3V061 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim80Q3V061 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim80Q3V061 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trim80Q3V061 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim80Q3V061 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim80Q3V061 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim80Q3V061 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Trim80Q3V061 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trim80Q3V061 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim80Q3V061 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms