Protein–RNA interactions for Protein: Q3UQU0

Brd9, Bromodomain-containing protein 9, mousemouse

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd9Q3UQU0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Brd9Q3UQU0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brd9Q3UQU0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brd9Q3UQU0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brd9Q3UQU0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brd9Q3UQU0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Gm11539-201ENSMUST00000119837 557 ntBASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Gm13436-201ENSMUST00000120418 567 ntBASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Brd9Q3UQU0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Gm13559-201ENSMUST00000120476 863 ntBASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Brd9Q3UQU0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.93■□□□□ 0.78
Brd9Q3UQU0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.92■□□□□ 0.78
Brd9Q3UQU0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brd9Q3UQU0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brd9Q3UQU0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Brd9Q3UQU0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brd9Q3UQU0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Brd9Q3UQU0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brd9Q3UQU0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.92■□□□□ 0.78
Brd9Q3UQU0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Brd9Q3UQU0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Brd9Q3UQU0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.92■□□□□ 0.78
Brd9Q3UQU0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Brd9Q3UQU0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brd9Q3UQU0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Brd9Q3UQU0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Brd9Q3UQU0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Brd9Q3UQU0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Brd9Q3UQU0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brd9Q3UQU0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brd9Q3UQU0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brd9Q3UQU0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Brd9Q3UQU0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Brd9Q3UQU0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.91■□□□□ 0.78
Brd9Q3UQU0 Gm38027-201ENSMUST00000192315 235 ntBASIC19.91■□□□□ 0.78
Brd9Q3UQU0 Gm7977-201ENSMUST00000193787 748 ntBASIC19.91■□□□□ 0.78
Brd9Q3UQU0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brd9Q3UQU0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.91■□□□□ 0.78
Brd9Q3UQU0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brd9Q3UQU0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brd9Q3UQU0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brd9Q3UQU0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.91■□□□□ 0.78
Brd9Q3UQU0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brd9Q3UQU0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.9■□□□□ 0.78
Brd9Q3UQU0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms