Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp30Q3UN04 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp30Q3UN04 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp30Q3UN04 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp30Q3UN04 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp30Q3UN04 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Usp30Q3UN04 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Usp30Q3UN04 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Usp30Q3UN04 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp30Q3UN04 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.89■□□□□ 0.45
Usp30Q3UN04 Gm27463-201ENSMUST00000183569 57 ntBASIC17.89■□□□□ 0.45
Usp30Q3UN04 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.89■□□□□ 0.45
Usp30Q3UN04 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp30Q3UN04 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp30Q3UN04 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp30Q3UN04 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp30Q3UN04 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Usp30Q3UN04 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp30Q3UN04 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp30Q3UN04 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Usp30Q3UN04 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.89■□□□□ 0.45
Usp30Q3UN04 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp30Q3UN04 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp30Q3UN04 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.88■□□□□ 0.45
Usp30Q3UN04 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp30Q3UN04 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp30Q3UN04 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Usp30Q3UN04 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp30Q3UN04 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.88■□□□□ 0.45
Usp30Q3UN04 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.88■□□□□ 0.45
Usp30Q3UN04 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Usp30Q3UN04 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp30Q3UN04 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp30Q3UN04 Gm4974-201ENSMUST00000209974 875 ntBASIC17.88■□□□□ 0.45
Usp30Q3UN04 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp30Q3UN04 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Usp30Q3UN04 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp30Q3UN04 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp30Q3UN04 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp30Q3UN04 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.88■□□□□ 0.45
Usp30Q3UN04 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp30Q3UN04 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp30Q3UN04 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp30Q3UN04 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp30Q3UN04 Gm12085-201ENSMUST00000119263 940 ntBASIC17.87■□□□□ 0.45
Usp30Q3UN04 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Usp30Q3UN04 Gm38027-201ENSMUST00000192315 235 ntBASIC17.87■□□□□ 0.45
Usp30Q3UN04 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.87■□□□□ 0.45
Usp30Q3UN04 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.87■□□□□ 0.45
Usp30Q3UN04 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.87■□□□□ 0.45
Usp30Q3UN04 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp30Q3UN04 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp30Q3UN04 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.87■□□□□ 0.45
Usp30Q3UN04 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp30Q3UN04 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp30Q3UN04 Tgds-204ENSMUST00000228543 1594 ntBASIC17.87■□□□□ 0.45
Usp30Q3UN04 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.86■□□□□ 0.45
Usp30Q3UN04 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.86■□□□□ 0.45
Usp30Q3UN04 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.86■□□□□ 0.45
Usp30Q3UN04 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp30Q3UN04 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp30Q3UN04 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Usp30Q3UN04 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp30Q3UN04 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp30Q3UN04 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp30Q3UN04 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp30Q3UN04 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Usp30Q3UN04 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.85■□□□□ 0.45
Usp30Q3UN04 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.85■□□□□ 0.45
Usp30Q3UN04 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp30Q3UN04 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp30Q3UN04 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp30Q3UN04 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp30Q3UN04 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp30Q3UN04 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp30Q3UN04 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.85■□□□□ 0.45
Usp30Q3UN04 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp30Q3UN04 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms