Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.25■□□□□ 0.99
Spg7Q3ULF4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Spg7Q3ULF4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Spg7Q3ULF4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Spg7Q3ULF4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Spg7Q3ULF4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Spg7Q3ULF4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Spg7Q3ULF4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Spg7Q3ULF4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Spg7Q3ULF4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Spg7Q3ULF4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Spg7Q3ULF4 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.24■□□□□ 0.99
Spg7Q3ULF4 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.24■□□□□ 0.99
Spg7Q3ULF4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.24■□□□□ 0.99
Spg7Q3ULF4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.24■□□□□ 0.99
Spg7Q3ULF4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Spg7Q3ULF4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.24■□□□□ 0.99
Spg7Q3ULF4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Spg7Q3ULF4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Spg7Q3ULF4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.24■□□□□ 0.99
Spg7Q3ULF4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Spg7Q3ULF4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Spg7Q3ULF4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Spg7Q3ULF4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Spg7Q3ULF4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Spg7Q3ULF4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Spg7Q3ULF4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Spg7Q3ULF4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Spg7Q3ULF4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Spg7Q3ULF4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Spg7Q3ULF4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Spg7Q3ULF4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Spg7Q3ULF4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Spg7Q3ULF4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.23■□□□□ 0.99
Spg7Q3ULF4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.23■□□□□ 0.99
Spg7Q3ULF4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.23■□□□□ 0.99
Spg7Q3ULF4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Spg7Q3ULF4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
Spg7Q3ULF4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Spg7Q3ULF4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.23■□□□□ 0.99
Spg7Q3ULF4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Spg7Q3ULF4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Spg7Q3ULF4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Spg7Q3ULF4 Gm18959-201ENSMUST00000208954 655 ntBASIC21.22■□□□□ 0.99
Spg7Q3ULF4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.22■□□□□ 0.99
Spg7Q3ULF4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.22■□□□□ 0.99
Spg7Q3ULF4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Spg7Q3ULF4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Spg7Q3ULF4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Spg7Q3ULF4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Spg7Q3ULF4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Spg7Q3ULF4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Spg7Q3ULF4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Spg7Q3ULF4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.22■□□□□ 0.99
Spg7Q3ULF4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Spg7Q3ULF4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.21■□□□□ 0.99
Spg7Q3ULF4 Gm29791-202ENSMUST00000207888 369 ntBASIC21.21■□□□□ 0.99
Spg7Q3ULF4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Spg7Q3ULF4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Spg7Q3ULF4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Spg7Q3ULF4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Spg7Q3ULF4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Spg7Q3ULF4 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.2■□□□□ 0.98
Spg7Q3ULF4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Spg7Q3ULF4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.2■□□□□ 0.98
Spg7Q3ULF4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Spg7Q3ULF4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Spg7Q3ULF4 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.2■□□□□ 0.98
Spg7Q3ULF4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.2■□□□□ 0.98
Spg7Q3ULF4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Spg7Q3ULF4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Spg7Q3ULF4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Spg7Q3ULF4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Spg7Q3ULF4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Spg7Q3ULF4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Spg7Q3ULF4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Spg7Q3ULF4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg7Q3ULF4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg7Q3ULF4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg7Q3ULF4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Spg7Q3ULF4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg7Q3ULF4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Spg7Q3ULF4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg7Q3ULF4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Spg7Q3ULF4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg7Q3ULF4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spg7Q3ULF4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Spg7Q3ULF4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Spg7Q3ULF4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.18■□□□□ 0.98
Spg7Q3ULF4 Gm13401-201ENSMUST00000117074 291 ntBASIC21.18■□□□□ 0.98
Spg7Q3ULF4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Spg7Q3ULF4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.18■□□□□ 0.98
Spg7Q3ULF4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Spg7Q3ULF4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Spg7Q3ULF4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Spg7Q3ULF4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Spg7Q3ULF4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Spg7Q3ULF4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Spg7Q3ULF4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Spg7Q3ULF4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms