Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Gm13559-201ENSMUST00000120476 863 ntBASIC19.28■□□□□ 0.68
Snx27Q3UHD6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Snx27Q3UHD6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snx27Q3UHD6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snx27Q3UHD6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Snx27Q3UHD6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snx27Q3UHD6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snx27Q3UHD6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snx27Q3UHD6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Snx27Q3UHD6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Gm7977-201ENSMUST00000193787 748 ntBASIC19.27■□□□□ 0.68
Snx27Q3UHD6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.27■□□□□ 0.68
Snx27Q3UHD6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Snx27Q3UHD6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.27■□□□□ 0.67
Snx27Q3UHD6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Snx27Q3UHD6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx27Q3UHD6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx27Q3UHD6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx27Q3UHD6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx27Q3UHD6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx27Q3UHD6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx27Q3UHD6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.26■□□□□ 0.67
Snx27Q3UHD6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.26■□□□□ 0.67
Snx27Q3UHD6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.26■□□□□ 0.67
Snx27Q3UHD6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx27Q3UHD6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx27Q3UHD6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx27Q3UHD6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Snx27Q3UHD6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx27Q3UHD6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx27Q3UHD6 Fst-202ENSMUST00000223640 2612 ntBASIC19.26■□□□□ 0.67
Snx27Q3UHD6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx27Q3UHD6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx27Q3UHD6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx27Q3UHD6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx27Q3UHD6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx27Q3UHD6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx27Q3UHD6 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.25■□□□□ 0.67
Snx27Q3UHD6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Snx27Q3UHD6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx27Q3UHD6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx27Q3UHD6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx27Q3UHD6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx27Q3UHD6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx27Q3UHD6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx27Q3UHD6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx27Q3UHD6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Gm38027-201ENSMUST00000192315 235 ntBASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx27Q3UHD6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Snx27Q3UHD6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Snx27Q3UHD6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.23■□□□□ 0.67
Snx27Q3UHD6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx27Q3UHD6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx27Q3UHD6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx27Q3UHD6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.23■□□□□ 0.67
Snx27Q3UHD6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms