Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lins1Q3U1D0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Lins1Q3U1D0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
Lins1Q3U1D0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.25■□□□□ 0.99
Lins1Q3U1D0 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.25■□□□□ 0.99
Lins1Q3U1D0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lins1Q3U1D0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lins1Q3U1D0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lins1Q3U1D0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lins1Q3U1D0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lins1Q3U1D0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Timm23-208ENSMUST00000226683 750 ntBASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lins1Q3U1D0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Gm3375-201ENSMUST00000203929 796 ntBASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lins1Q3U1D0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lins1Q3U1D0 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.22■□□□□ 0.99
Lins1Q3U1D0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lins1Q3U1D0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lins1Q3U1D0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Lins1Q3U1D0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lins1Q3U1D0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lins1Q3U1D0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Lins1Q3U1D0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lins1Q3U1D0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Lins1Q3U1D0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lins1Q3U1D0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lins1Q3U1D0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lins1Q3U1D0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lins1Q3U1D0 Gm13559-201ENSMUST00000120476 863 ntBASIC21.21■□□□□ 0.99
Lins1Q3U1D0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.21■□□□□ 0.99
Lins1Q3U1D0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lins1Q3U1D0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lins1Q3U1D0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lins1Q3U1D0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lins1Q3U1D0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lins1Q3U1D0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lins1Q3U1D0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Lins1Q3U1D0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lins1Q3U1D0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lins1Q3U1D0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lins1Q3U1D0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.2■□□□□ 0.98
Lins1Q3U1D0 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.2■□□□□ 0.98
Lins1Q3U1D0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lins1Q3U1D0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lins1Q3U1D0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Lins1Q3U1D0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Lins1Q3U1D0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lins1Q3U1D0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lins1Q3U1D0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lins1Q3U1D0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.19■□□□□ 0.98
Lins1Q3U1D0 Gm11539-201ENSMUST00000119837 557 ntBASIC21.19■□□□□ 0.98
Lins1Q3U1D0 Gm13436-201ENSMUST00000120418 567 ntBASIC21.19■□□□□ 0.98
Lins1Q3U1D0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.19■□□□□ 0.98
Lins1Q3U1D0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lins1Q3U1D0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lins1Q3U1D0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.19■□□□□ 0.98
Lins1Q3U1D0 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.19■□□□□ 0.98
Lins1Q3U1D0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Lins1Q3U1D0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Lins1Q3U1D0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lins1Q3U1D0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lins1Q3U1D0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lins1Q3U1D0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lins1Q3U1D0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
Lins1Q3U1D0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lins1Q3U1D0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lins1Q3U1D0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Lins1Q3U1D0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.18■□□□□ 0.98
Lins1Q3U1D0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lins1Q3U1D0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms