Protein–RNA interactions for Protein: Q2WF71

Lrfn1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, mousemouse

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn1Q2WF71 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrfn1Q2WF71 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.47■□□□□ 0.23
Lrfn1Q2WF71 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrfn1Q2WF71 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lrfn1Q2WF71 Gm43060-201ENSMUST00000200621 289 ntBASIC16.47■□□□□ 0.23
Lrfn1Q2WF71 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lrfn1Q2WF71 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.47■□□□□ 0.23
Lrfn1Q2WF71 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrfn1Q2WF71 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrfn1Q2WF71 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lrfn1Q2WF71 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lrfn1Q2WF71 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.47■□□□□ 0.23
Lrfn1Q2WF71 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Lrfn1Q2WF71 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrfn1Q2WF71 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrfn1Q2WF71 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lrfn1Q2WF71 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lrfn1Q2WF71 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrfn1Q2WF71 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.46■□□□□ 0.23
Lrfn1Q2WF71 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrfn1Q2WF71 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Lrfn1Q2WF71 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Lrfn1Q2WF71 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Lrfn1Q2WF71 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Lrfn1Q2WF71 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Lrfn1Q2WF71 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Lrfn1Q2WF71 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
Lrfn1Q2WF71 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Lrfn1Q2WF71 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrfn1Q2WF71 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrfn1Q2WF71 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrfn1Q2WF71 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrfn1Q2WF71 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrfn1Q2WF71 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrfn1Q2WF71 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrfn1Q2WF71 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrfn1Q2WF71 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrfn1Q2WF71 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrfn1Q2WF71 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrfn1Q2WF71 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Lrfn1Q2WF71 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrfn1Q2WF71 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrfn1Q2WF71 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.44■□□□□ 0.22
Lrfn1Q2WF71 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrfn1Q2WF71 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Lrfn1Q2WF71 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrfn1Q2WF71 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Lrfn1Q2WF71 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrfn1Q2WF71 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lrfn1Q2WF71 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.42■□□□□ 0.22
Lrfn1Q2WF71 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.42■□□□□ 0.22
Lrfn1Q2WF71 Gm11421-201ENSMUST00000122124 294 ntBASIC16.42■□□□□ 0.22
Lrfn1Q2WF71 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lrfn1Q2WF71 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lrfn1Q2WF71 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.42■□□□□ 0.22
Lrfn1Q2WF71 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Lrfn1Q2WF71 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrfn1Q2WF71 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrfn1Q2WF71 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms