Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col19a1Q0VF58 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col19a1Q0VF58 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col19a1Q0VF58 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col19a1Q0VF58 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col19a1Q0VF58 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col19a1Q0VF58 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col19a1Q0VF58 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Col19a1Q0VF58 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col19a1Q0VF58 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.06■□□□□ 0.64
Col19a1Q0VF58 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Col19a1Q0VF58 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.06■□□□□ 0.64
Col19a1Q0VF58 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col19a1Q0VF58 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col19a1Q0VF58 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col19a1Q0VF58 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
Col19a1Q0VF58 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Col19a1Q0VF58 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col19a1Q0VF58 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.05■□□□□ 0.64
Col19a1Q0VF58 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col19a1Q0VF58 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.05■□□□□ 0.64
Col19a1Q0VF58 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col19a1Q0VF58 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col19a1Q0VF58 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col19a1Q0VF58 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.05■□□□□ 0.64
Col19a1Q0VF58 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col19a1Q0VF58 Gm45328-201ENSMUST00000210942 917 ntBASIC19.05■□□□□ 0.64
Col19a1Q0VF58 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
Col19a1Q0VF58 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col19a1Q0VF58 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col19a1Q0VF58 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col19a1Q0VF58 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col19a1Q0VF58 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col19a1Q0VF58 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col19a1Q0VF58 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Col19a1Q0VF58 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col19a1Q0VF58 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col19a1Q0VF58 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col19a1Q0VF58 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col19a1Q0VF58 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col19a1Q0VF58 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col19a1Q0VF58 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Col19a1Q0VF58 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col19a1Q0VF58 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col19a1Q0VF58 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col19a1Q0VF58 Gm13401-201ENSMUST00000117074 291 ntBASIC19.03■□□□□ 0.64
Col19a1Q0VF58 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.03■□□□□ 0.64
Col19a1Q0VF58 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col19a1Q0VF58 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.03■□□□□ 0.64
Col19a1Q0VF58 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.03■□□□□ 0.64
Col19a1Q0VF58 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Col19a1Q0VF58 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col19a1Q0VF58 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Col19a1Q0VF58 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Col19a1Q0VF58 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col19a1Q0VF58 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col19a1Q0VF58 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col19a1Q0VF58 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.02■□□□□ 0.64
Col19a1Q0VF58 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col19a1Q0VF58 Gm9731-201ENSMUST00000209480 747 ntBASIC19.02■□□□□ 0.64
Col19a1Q0VF58 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col19a1Q0VF58 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col19a1Q0VF58 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col19a1Q0VF58 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Col19a1Q0VF58 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col19a1Q0VF58 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col19a1Q0VF58 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col19a1Q0VF58 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col19a1Q0VF58 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col19a1Q0VF58 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col19a1Q0VF58 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col19a1Q0VF58 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col19a1Q0VF58 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.01■□□□□ 0.63
Col19a1Q0VF58 Il3ra-202ENSMUST00000223589 738 ntBASIC19.01■□□□□ 0.63
Col19a1Q0VF58 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col19a1Q0VF58 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col19a1Q0VF58 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col19a1Q0VF58 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Col19a1Q0VF58 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col19a1Q0VF58 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Col19a1Q0VF58 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col19a1Q0VF58 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col19a1Q0VF58 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Col19a1Q0VF58 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Col19a1Q0VF58 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19■□□□□ 0.63
Col19a1Q0VF58 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19■□□□□ 0.63
Col19a1Q0VF58 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col19a1Q0VF58 AC124569.2-201ENSMUST00000225998 818 ntBASIC19■□□□□ 0.63
Col19a1Q0VF58 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col19a1Q0VF58 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Col19a1Q0VF58 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Col19a1Q0VF58 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Col19a1Q0VF58 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col19a1Q0VF58 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col19a1Q0VF58 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Col19a1Q0VF58 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.99■□□□□ 0.63
Col19a1Q0VF58 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col19a1Q0VF58 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col19a1Q0VF58 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col19a1Q0VF58 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms