Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptchd3Q0EEE2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptchd3Q0EEE2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ptchd3Q0EEE2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptchd3Q0EEE2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptchd3Q0EEE2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ptchd3Q0EEE2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ptchd3Q0EEE2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptchd3Q0EEE2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Ptchd3Q0EEE2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ptchd3Q0EEE2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ptchd3Q0EEE2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ptchd3Q0EEE2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ptchd3Q0EEE2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ptchd3Q0EEE2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ptchd3Q0EEE2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.2■□□□□ 0.34
Ptchd3Q0EEE2 Gm5874-201ENSMUST00000096101 508 ntBASIC17.2■□□□□ 0.34
Ptchd3Q0EEE2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.2■□□□□ 0.34
Ptchd3Q0EEE2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ptchd3Q0EEE2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ptchd3Q0EEE2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ptchd3Q0EEE2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ptchd3Q0EEE2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ptchd3Q0EEE2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ptchd3Q0EEE2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ptchd3Q0EEE2 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.19■□□□□ 0.34
Ptchd3Q0EEE2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ptchd3Q0EEE2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ptchd3Q0EEE2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ptchd3Q0EEE2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ptchd3Q0EEE2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ptchd3Q0EEE2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ptchd3Q0EEE2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ptchd3Q0EEE2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptchd3Q0EEE2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Gm13146-201ENSMUST00000118508 780 ntBASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptchd3Q0EEE2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms