Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Chd8Q09XV5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chd8Q09XV5 Gm15372-201ENSMUST00000120729 834 ntBASIC16.02■□□□□ 0.15
Chd8Q09XV5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Chd8Q09XV5 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.02■□□□□ 0.15
Chd8Q09XV5 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chd8Q09XV5 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chd8Q09XV5 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.02■□□□□ 0.15
Chd8Q09XV5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chd8Q09XV5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chd8Q09XV5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chd8Q09XV5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Chd8Q09XV5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd8Q09XV5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd8Q09XV5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Chd8Q09XV5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.01■□□□□ 0.15
Chd8Q09XV5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd8Q09XV5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Chd8Q09XV5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd8Q09XV5 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chd8Q09XV5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chd8Q09XV5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chd8Q09XV5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chd8Q09XV5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Chd8Q09XV5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd8Q09XV5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chd8Q09XV5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Chd8Q09XV5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chd8Q09XV5 Gm9727-201ENSMUST00000161387 555 ntBASIC16■□□□□ 0.15
Chd8Q09XV5 AA543401-201ENSMUST00000164248 1269 ntBASIC16■□□□□ 0.15
Chd8Q09XV5 Gm45683-201ENSMUST00000210825 1247 ntBASIC16■□□□□ 0.15
Chd8Q09XV5 AC108846.1-201ENSMUST00000214531 513 ntBASIC16■□□□□ 0.15
Chd8Q09XV5 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chd8Q09XV5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chd8Q09XV5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chd8Q09XV5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Chd8Q09XV5 Gm37722-201ENSMUST00000193757 208 ntBASIC16■□□□□ 0.15
Chd8Q09XV5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chd8Q09XV5 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chd8Q09XV5 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chd8Q09XV5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chd8Q09XV5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.99■□□□□ 0.15
Chd8Q09XV5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm14701-201ENSMUST00000117156 348 ntBASIC15.99■□□□□ 0.15
Chd8Q09XV5 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Chd8Q09XV5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm44357-201ENSMUST00000195897 142 ntBASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm19658-201ENSMUST00000196231 138 ntBASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm44367-201ENSMUST00000196836 138 ntBASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm44350-201ENSMUST00000197197 138 ntBASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm44390-201ENSMUST00000197533 144 ntBASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm44313-201ENSMUST00000198018 138 ntBASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm44486-201ENSMUST00000198508 138 ntBASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm44454-201ENSMUST00000198541 138 ntBASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm44314-201ENSMUST00000199263 138 ntBASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm44394-201ENSMUST00000199558 138 ntBASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm44484-201ENSMUST00000199873 138 ntBASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm44466-201ENSMUST00000200264 138 ntBASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm44359-201ENSMUST00000200671 138 ntBASIC15.99■□□□□ 0.15
Chd8Q09XV5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.99■□□□□ 0.15
Chd8Q09XV5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd8Q09XV5 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd8Q09XV5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Chd8Q09XV5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chd8Q09XV5 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.98■□□□□ 0.15
Chd8Q09XV5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
Chd8Q09XV5 Gm12644-201ENSMUST00000119935 606 ntBASIC15.98■□□□□ 0.15
Chd8Q09XV5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd8Q09XV5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd8Q09XV5 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd8Q09XV5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Chd8Q09XV5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd8Q09XV5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chd8Q09XV5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.98■□□□□ 0.15
Chd8Q09XV5 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.98■□□□□ 0.15
Chd8Q09XV5 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd8Q09XV5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd8Q09XV5 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.98■□□□□ 0.15
Chd8Q09XV5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Chd8Q09XV5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Chd8Q09XV5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chd8Q09XV5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chd8Q09XV5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Chd8Q09XV5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms