Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrkdcP97313 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC12.28□□□□□ -0.44
PrkdcP97313 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.28□□□□□ -0.44
PrkdcP97313 Gm5264-201ENSMUST00000190584 848 ntBASIC12.28□□□□□ -0.44
PrkdcP97313 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
PrkdcP97313 Actl10-202ENSMUST00000226583 1501 ntBASIC12.28□□□□□ -0.44
PrkdcP97313 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrkdcP97313 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
PrkdcP97313 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrkdcP97313 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PrkdcP97313 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.28□□□□□ -0.44
PrkdcP97313 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.28□□□□□ -0.44
PrkdcP97313 Gm12350-201ENSMUST00000121208 462 ntBASIC12.28□□□□□ -0.44
PrkdcP97313 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PrkdcP97313 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.28□□□□□ -0.44
PrkdcP97313 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrkdcP97313 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrkdcP97313 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PrkdcP97313 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrkdcP97313 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrkdcP97313 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
PrkdcP97313 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
PrkdcP97313 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrkdcP97313 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrkdcP97313 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrkdcP97313 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
PrkdcP97313 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
PrkdcP97313 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC12.28□□□□□ -0.44
PrkdcP97313 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
PrkdcP97313 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrkdcP97313 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
PrkdcP97313 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PrkdcP97313 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PrkdcP97313 Mir5126-201ENSMUST00000175513 77 ntBASIC12.27□□□□□ -0.44
PrkdcP97313 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PrkdcP97313 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
PrkdcP97313 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
PrkdcP97313 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
PrkdcP97313 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
PrkdcP97313 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PrkdcP97313 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PrkdcP97313 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkdcP97313 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
PrkdcP97313 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkdcP97313 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkdcP97313 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkdcP97313 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PrkdcP97313 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PrkdcP97313 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PrkdcP97313 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkdcP97313 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.27□□□□□ -0.45
PrkdcP97313 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkdcP97313 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
PrkdcP97313 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.26□□□□□ -0.45
PrkdcP97313 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.26□□□□□ -0.45
PrkdcP97313 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.26□□□□□ -0.45
PrkdcP97313 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkdcP97313 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PrkdcP97313 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkdcP97313 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkdcP97313 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.26□□□□□ -0.45
PrkdcP97313 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkdcP97313 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PrkdcP97313 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PrkdcP97313 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.26□□□□□ -0.45
PrkdcP97313 Gm4995-201ENSMUST00000117247 432 ntBASIC12.26□□□□□ -0.45
PrkdcP97313 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.26□□□□□ -0.45
PrkdcP97313 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.26□□□□□ -0.45
PrkdcP97313 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkdcP97313 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkdcP97313 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PrkdcP97313 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkdcP97313 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.26□□□□□ -0.45
PrkdcP97313 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
PrkdcP97313 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.26□□□□□ -0.45
PrkdcP97313 Gm10060-201ENSMUST00000212002 111 ntBASIC12.26□□□□□ -0.45
PrkdcP97313 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkdcP97313 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkdcP97313 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PrkdcP97313 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
PrkdcP97313 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
PrkdcP97313 Gm8000-201ENSMUST00000188378 592 ntBASIC12.25□□□□□ -0.45
PrkdcP97313 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrkdcP97313 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PrkdcP97313 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrkdcP97313 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.25□□□□□ -0.45
PrkdcP97313 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrkdcP97313 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.25□□□□□ -0.45
PrkdcP97313 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.25□□□□□ -0.45
PrkdcP97313 Gm4974-201ENSMUST00000209974 875 ntBASIC12.25□□□□□ -0.45
PrkdcP97313 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrkdcP97313 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrkdcP97313 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
PrkdcP97313 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.25□□□□□ -0.45
PrkdcP97313 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.25□□□□□ -0.45
PrkdcP97313 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PrkdcP97313 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PrkdcP97313 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PrkdcP97313 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PrkdcP97313 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms