Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CiitaP79621 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CiitaP79621 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.33■□□□□ 0.68
CiitaP79621 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.33■□□□□ 0.68
CiitaP79621 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CiitaP79621 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CiitaP79621 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CiitaP79621 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CiitaP79621 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CiitaP79621 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CiitaP79621 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CiitaP79621 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.32■□□□□ 0.68
CiitaP79621 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CiitaP79621 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CiitaP79621 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CiitaP79621 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CiitaP79621 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CiitaP79621 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CiitaP79621 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.32■□□□□ 0.68
CiitaP79621 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CiitaP79621 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.32■□□□□ 0.68
CiitaP79621 Gm3375-201ENSMUST00000203929 796 ntBASIC19.32■□□□□ 0.68
CiitaP79621 Timm23-208ENSMUST00000226683 750 ntBASIC19.32■□□□□ 0.68
CiitaP79621 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.32■□□□□ 0.68
CiitaP79621 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CiitaP79621 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CiitaP79621 Gm5417-201ENSMUST00000079706 384 ntBASIC19.32■□□□□ 0.68
CiitaP79621 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CiitaP79621 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CiitaP79621 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CiitaP79621 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CiitaP79621 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.32■□□□□ 0.68
CiitaP79621 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CiitaP79621 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CiitaP79621 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CiitaP79621 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CiitaP79621 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CiitaP79621 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CiitaP79621 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CiitaP79621 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CiitaP79621 Gm10418-201ENSMUST00000100943 576 ntBASIC19.31■□□□□ 0.68
CiitaP79621 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.31■□□□□ 0.68
CiitaP79621 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CiitaP79621 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CiitaP79621 Gm10517-202ENSMUST00000192970 758 ntBASIC19.31■□□□□ 0.68
CiitaP79621 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CiitaP79621 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CiitaP79621 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.31■□□□□ 0.68
CiitaP79621 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CiitaP79621 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CiitaP79621 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CiitaP79621 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CiitaP79621 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CiitaP79621 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CiitaP79621 Gm13401-201ENSMUST00000117074 291 ntBASIC19.3■□□□□ 0.68
CiitaP79621 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CiitaP79621 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CiitaP79621 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CiitaP79621 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CiitaP79621 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CiitaP79621 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CiitaP79621 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CiitaP79621 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CiitaP79621 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CiitaP79621 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
CiitaP79621 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CiitaP79621 Fst-202ENSMUST00000223640 2612 ntBASIC19.29■□□□□ 0.68
CiitaP79621 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CiitaP79621 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CiitaP79621 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CiitaP79621 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CiitaP79621 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CiitaP79621 Mir7071-201ENSMUST00000184847 69 ntBASIC19.29■□□□□ 0.68
CiitaP79621 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.29■□□□□ 0.68
CiitaP79621 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.29■□□□□ 0.68
CiitaP79621 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CiitaP79621 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CiitaP79621 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CiitaP79621 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CiitaP79621 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CiitaP79621 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CiitaP79621 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CiitaP79621 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CiitaP79621 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CiitaP79621 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CiitaP79621 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CiitaP79621 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CiitaP79621 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.28■□□□□ 0.68
CiitaP79621 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CiitaP79621 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CiitaP79621 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CiitaP79621 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CiitaP79621 Gm29791-202ENSMUST00000207888 369 ntBASIC19.28■□□□□ 0.68
CiitaP79621 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CiitaP79621 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CiitaP79621 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CiitaP79621 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CiitaP79621 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CiitaP79621 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CiitaP79621 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms