Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim4P70271 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim4P70271 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim4P70271 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.82□□□□□ -0.04
Pdlim4P70271 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim4P70271 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pdlim4P70271 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim4P70271 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim4P70271 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim4P70271 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim4P70271 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim4P70271 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim4P70271 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pdlim4P70271 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim4P70271 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Pdlim4P70271 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim4P70271 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim4P70271 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim4P70271 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.81□□□□□ -0.04
Pdlim4P70271 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.81□□□□□ -0.04
Pdlim4P70271 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim4P70271 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim4P70271 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.81□□□□□ -0.04
Pdlim4P70271 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim4P70271 Flg-201ENSMUST00000050758 1488 ntBASIC14.81□□□□□ -0.04
Pdlim4P70271 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim4P70271 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim4P70271 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.81□□□□□ -0.04
Pdlim4P70271 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim4P70271 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim4P70271 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim4P70271 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim4P70271 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim4P70271 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim4P70271 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim4P70271 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim4P70271 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pdlim4P70271 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim4P70271 Gm12896-201ENSMUST00000118430 226 ntBASIC14.8□□□□□ -0.04
Pdlim4P70271 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.8□□□□□ -0.04
Pdlim4P70271 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim4P70271 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim4P70271 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.8□□□□□ -0.04
Pdlim4P70271 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Pdlim4P70271 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim4P70271 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim4P70271 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pdlim4P70271 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim4P70271 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim4P70271 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim4P70271 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.8□□□□□ -0.04
Pdlim4P70271 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim4P70271 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.8□□□□□ -0.04
Pdlim4P70271 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim4P70271 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim4P70271 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim4P70271 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim4P70271 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.79□□□□□ -0.04
Pdlim4P70271 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim4P70271 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.79□□□□□ -0.04
Pdlim4P70271 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.79□□□□□ -0.04
Pdlim4P70271 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.79□□□□□ -0.04
Pdlim4P70271 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim4P70271 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim4P70271 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim4P70271 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.79□□□□□ -0.04
Pdlim4P70271 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim4P70271 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim4P70271 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim4P70271 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim4P70271 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim4P70271 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim4P70271 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim4P70271 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim4P70271 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim4P70271 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.78□□□□□ -0.04
Pdlim4P70271 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim4P70271 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim4P70271 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim4P70271 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim4P70271 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim4P70271 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim4P70271 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Pdlim4P70271 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim4P70271 Gm20049-201ENSMUST00000219950 730 ntBASIC14.78□□□□□ -0.04
Pdlim4P70271 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim4P70271 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pdlim4P70271 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pdlim4P70271 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim4P70271 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Pdlim4P70271 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim4P70271 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim4P70271 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.77□□□□□ -0.04
Pdlim4P70271 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim4P70271 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Pdlim4P70271 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim4P70271 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim4P70271 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim4P70271 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim4P70271 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms