Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Crnkl1P63154 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crnkl1P63154 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.65■□□□□ 0.42
Crnkl1P63154 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crnkl1P63154 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crnkl1P63154 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crnkl1P63154 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crnkl1P63154 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Crnkl1P63154 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Crnkl1P63154 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Crnkl1P63154 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Crnkl1P63154 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Crnkl1P63154 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Crnkl1P63154 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Crnkl1P63154 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Crnkl1P63154 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Crnkl1P63154 Gm40848-201ENSMUST00000221998 324 ntBASIC17.64■□□□□ 0.41
Crnkl1P63154 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Crnkl1P63154 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Crnkl1P63154 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Crnkl1P63154 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Crnkl1P63154 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Crnkl1P63154 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Crnkl1P63154 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Crnkl1P63154 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Crnkl1P63154 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Crnkl1P63154 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Crnkl1P63154 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Crnkl1P63154 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Crnkl1P63154 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Crnkl1P63154 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Crnkl1P63154 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Crnkl1P63154 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Crnkl1P63154 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Crnkl1P63154 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Crnkl1P63154 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Crnkl1P63154 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Crnkl1P63154 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Crnkl1P63154 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Crnkl1P63154 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Crnkl1P63154 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.62■□□□□ 0.41
Crnkl1P63154 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.62■□□□□ 0.41
Crnkl1P63154 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.62■□□□□ 0.41
Crnkl1P63154 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Crnkl1P63154 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Crnkl1P63154 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Crnkl1P63154 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Crnkl1P63154 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Crnkl1P63154 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Crnkl1P63154 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Crnkl1P63154 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Crnkl1P63154 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Crnkl1P63154 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Crnkl1P63154 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Crnkl1P63154 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Crnkl1P63154 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.62■□□□□ 0.41
Crnkl1P63154 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.62■□□□□ 0.41
Crnkl1P63154 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Crnkl1P63154 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Crnkl1P63154 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Crnkl1P63154 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Crnkl1P63154 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Crnkl1P63154 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Crnkl1P63154 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Crnkl1P63154 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Crnkl1P63154 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Crnkl1P63154 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Crnkl1P63154 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Crnkl1P63154 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Crnkl1P63154 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Crnkl1P63154 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.6■□□□□ 0.41
Crnkl1P63154 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.6■□□□□ 0.41
Crnkl1P63154 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Crnkl1P63154 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Crnkl1P63154 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Crnkl1P63154 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Crnkl1P63154 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Crnkl1P63154 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Crnkl1P63154 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Crnkl1P63154 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Crnkl1P63154 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Crnkl1P63154 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Crnkl1P63154 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Crnkl1P63154 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Crnkl1P63154 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Crnkl1P63154 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Crnkl1P63154 Haglr-201ENSMUST00000100000 2085 ntBASIC17.59■□□□□ 0.41
Crnkl1P63154 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Crnkl1P63154 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Crnkl1P63154 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Crnkl1P63154 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Crnkl1P63154 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Crnkl1P63154 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Crnkl1P63154 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Crnkl1P63154 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.59■□□□□ 0.41
Crnkl1P63154 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Crnkl1P63154 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Crnkl1P63154 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Crnkl1P63154 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Crnkl1P63154 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms