Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nup43P59235 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.84■□□□□ 0.29
Nup43P59235 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nup43P59235 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nup43P59235 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nup43P59235 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nup43P59235 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nup43P59235 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nup43P59235 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.84■□□□□ 0.29
Nup43P59235 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Nup43P59235 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.84■□□□□ 0.29
Nup43P59235 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nup43P59235 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nup43P59235 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nup43P59235 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Nup43P59235 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup43P59235 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.83■□□□□ 0.28
Nup43P59235 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nup43P59235 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup43P59235 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup43P59235 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nup43P59235 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nup43P59235 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup43P59235 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup43P59235 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup43P59235 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nup43P59235 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Nup43P59235 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup43P59235 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nup43P59235 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nup43P59235 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.82■□□□□ 0.28
Nup43P59235 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup43P59235 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup43P59235 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.82■□□□□ 0.28
Nup43P59235 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup43P59235 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup43P59235 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.82■□□□□ 0.28
Nup43P59235 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup43P59235 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup43P59235 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup43P59235 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nup43P59235 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nup43P59235 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup43P59235 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup43P59235 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup43P59235 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Nup43P59235 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup43P59235 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nup43P59235 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup43P59235 Gm5643-201ENSMUST00000117081 966 ntBASIC16.81■□□□□ 0.28
Nup43P59235 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nup43P59235 Gm15375-201ENSMUST00000119510 849 ntBASIC16.81■□□□□ 0.28
Nup43P59235 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.81■□□□□ 0.28
Nup43P59235 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Nup43P59235 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup43P59235 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Nup43P59235 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup43P59235 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup43P59235 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup43P59235 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup43P59235 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup43P59235 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Nup43P59235 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nup43P59235 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nup43P59235 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nup43P59235 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.8■□□□□ 0.28
Nup43P59235 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup43P59235 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nup43P59235 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup43P59235 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Nup43P59235 Gm13168-201ENSMUST00000121771 632 ntBASIC16.8■□□□□ 0.28
Nup43P59235 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nup43P59235 Mir6349-201ENSMUST00000184059 97 ntBASIC16.8■□□□□ 0.28
Nup43P59235 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup43P59235 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.8■□□□□ 0.28
Nup43P59235 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nup43P59235 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.8■□□□□ 0.28
Nup43P59235 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Nup43P59235 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.8■□□□□ 0.28
Nup43P59235 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Nup43P59235 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup43P59235 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.79■□□□□ 0.28
Nup43P59235 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup43P59235 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.79■□□□□ 0.28
Nup43P59235 Grk6-206ENSMUST00000224995 2971 ntBASIC16.79■□□□□ 0.28
Nup43P59235 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.79■□□□□ 0.28
Nup43P59235 Gm8520-201ENSMUST00000186517 868 ntBASIC16.79■□□□□ 0.28
Nup43P59235 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup43P59235 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Nup43P59235 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nup43P59235 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nup43P59235 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Nup43P59235 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.79■□□□□ 0.28
Nup43P59235 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup43P59235 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup43P59235 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nup43P59235 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nup43P59235 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup43P59235 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup43P59235 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms