Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne2P59108 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpne2P59108 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpne2P59108 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne2P59108 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpne2P59108 Gm7860-201ENSMUST00000121190 879 ntBASIC15.04■□□□□ -0
Cpne2P59108 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cpne2P59108 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne2P59108 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.04■□□□□ -0
Cpne2P59108 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne2P59108 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne2P59108 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne2P59108 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne2P59108 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cpne2P59108 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne2P59108 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne2P59108 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpne2P59108 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne2P59108 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Cpne2P59108 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpne2P59108 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.03■□□□□ -0
Cpne2P59108 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cpne2P59108 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne2P59108 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.03■□□□□ -0
Cpne2P59108 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cpne2P59108 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpne2P59108 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.02■□□□□ -0
Cpne2P59108 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cpne2P59108 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cpne2P59108 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.02■□□□□ -0
Cpne2P59108 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Cpne2P59108 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cpne2P59108 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.02■□□□□ -0
Cpne2P59108 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpne2P59108 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cpne2P59108 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.02□□□□□ -0.01
Cpne2P59108 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne2P59108 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne2P59108 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne2P59108 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne2P59108 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne2P59108 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Cpne2P59108 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne2P59108 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne2P59108 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne2P59108 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne2P59108 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne2P59108 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cpne2P59108 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.01□□□□□ -0.01
Cpne2P59108 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.01□□□□□ -0.01
Cpne2P59108 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.01□□□□□ -0.01
Cpne2P59108 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cpne2P59108 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne2P59108 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne2P59108 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne2P59108 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne2P59108 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne2P59108 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne2P59108 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne2P59108 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne2P59108 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Cpne2P59108 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne2P59108 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Cpne2P59108 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15□□□□□ -0.01
Cpne2P59108 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpne2P59108 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cpne2P59108 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms