Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tubgcp3P58854 Gm44549-201ENSMUST00000208351 577 ntBASIC18.2■□□□□ 0.5
Tubgcp3P58854 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.2■□□□□ 0.5
Tubgcp3P58854 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tubgcp3P58854 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tubgcp3P58854 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tubgcp3P58854 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tubgcp3P58854 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Tubgcp3P58854 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Tubgcp3P58854 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tubgcp3P58854 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tubgcp3P58854 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tubgcp3P58854 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tubgcp3P58854 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tubgcp3P58854 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tubgcp3P58854 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.19■□□□□ 0.5
Tubgcp3P58854 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tubgcp3P58854 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tubgcp3P58854 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tubgcp3P58854 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tubgcp3P58854 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tubgcp3P58854 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tubgcp3P58854 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tubgcp3P58854 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tubgcp3P58854 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tubgcp3P58854 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tubgcp3P58854 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Tubgcp3P58854 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tubgcp3P58854 Gm2399-201ENSMUST00000104944 225 ntBASIC18.18■□□□□ 0.5
Tubgcp3P58854 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.18■□□□□ 0.5
Tubgcp3P58854 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tubgcp3P58854 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tubgcp3P58854 Rab3c-203ENSMUST00000224180 967 ntBASIC18.18■□□□□ 0.5
Tubgcp3P58854 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Tubgcp3P58854 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Tubgcp3P58854 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tubgcp3P58854 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.18■□□□□ 0.5
Tubgcp3P58854 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tubgcp3P58854 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.18■□□□□ 0.5
Tubgcp3P58854 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tubgcp3P58854 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tubgcp3P58854 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Tubgcp3P58854 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.17■□□□□ 0.5
Tubgcp3P58854 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Tubgcp3P58854 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tubgcp3P58854 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp3P58854 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp3P58854 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp3P58854 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp3P58854 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp3P58854 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp3P58854 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp3P58854 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp3P58854 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.16■□□□□ 0.5
Tubgcp3P58854 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.16■□□□□ 0.5
Tubgcp3P58854 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tubgcp3P58854 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.16■□□□□ 0.5
Tubgcp3P58854 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tubgcp3P58854 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp3P58854 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp3P58854 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp3P58854 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp3P58854 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp3P58854 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp3P58854 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Tubgcp3P58854 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp3P58854 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp3P58854 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.15■□□□□ 0.5
Tubgcp3P58854 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp3P58854 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp3P58854 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp3P58854 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp3P58854 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp3P58854 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tubgcp3P58854 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp3P58854 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tubgcp3P58854 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.14■□□□□ 0.49
Tubgcp3P58854 Gm5408-201ENSMUST00000197998 747 ntBASIC18.14■□□□□ 0.49
Tubgcp3P58854 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Tubgcp3P58854 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms