Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sssca1P56873 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sssca1P56873 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.43□□□□□ -0.1
Sssca1P56873 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sssca1P56873 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sssca1P56873 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sssca1P56873 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sssca1P56873 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.42□□□□□ -0.1
Sssca1P56873 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.42□□□□□ -0.1
Sssca1P56873 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sssca1P56873 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sssca1P56873 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Sssca1P56873 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sssca1P56873 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sssca1P56873 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sssca1P56873 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sssca1P56873 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sssca1P56873 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.41□□□□□ -0.1
Sssca1P56873 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.41□□□□□ -0.1
Sssca1P56873 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sssca1P56873 Gm13146-201ENSMUST00000118508 780 ntBASIC14.41□□□□□ -0.1
Sssca1P56873 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sssca1P56873 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sssca1P56873 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.41□□□□□ -0.1
Sssca1P56873 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sssca1P56873 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sssca1P56873 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sssca1P56873 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Sssca1P56873 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sssca1P56873 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sssca1P56873 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sssca1P56873 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Sssca1P56873 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sssca1P56873 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sssca1P56873 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sssca1P56873 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.4□□□□□ -0.1
Sssca1P56873 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sssca1P56873 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.4□□□□□ -0.1
Sssca1P56873 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Sssca1P56873 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.4□□□□□ -0.1
Sssca1P56873 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sssca1P56873 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.4□□□□□ -0.1
Sssca1P56873 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sssca1P56873 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sssca1P56873 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Sssca1P56873 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sssca1P56873 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sssca1P56873 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sssca1P56873 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sssca1P56873 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sssca1P56873 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sssca1P56873 Gm13534-201ENSMUST00000121169 513 ntBASIC14.39□□□□□ -0.11
Sssca1P56873 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.39□□□□□ -0.11
Sssca1P56873 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sssca1P56873 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sssca1P56873 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sssca1P56873 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Sssca1P56873 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sssca1P56873 Reep4-203ENSMUST00000226563 1444 ntBASIC14.39□□□□□ -0.11
Sssca1P56873 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.39□□□□□ -0.11
Sssca1P56873 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sssca1P56873 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sssca1P56873 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms