Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SmoP56726 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SmoP56726 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SmoP56726 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.92■□□□□ 0.46
SmoP56726 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SmoP56726 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SmoP56726 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SmoP56726 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SmoP56726 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SmoP56726 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SmoP56726 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SmoP56726 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SmoP56726 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SmoP56726 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SmoP56726 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SmoP56726 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SmoP56726 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.91■□□□□ 0.46
SmoP56726 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SmoP56726 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.91■□□□□ 0.46
SmoP56726 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.91■□□□□ 0.46
SmoP56726 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SmoP56726 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SmoP56726 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SmoP56726 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SmoP56726 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.91■□□□□ 0.46
SmoP56726 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SmoP56726 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SmoP56726 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.91■□□□□ 0.46
SmoP56726 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SmoP56726 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.9■□□□□ 0.46
SmoP56726 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.9■□□□□ 0.46
SmoP56726 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
SmoP56726 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SmoP56726 Gm10418-201ENSMUST00000100943 576 ntBASIC17.9■□□□□ 0.46
SmoP56726 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.9■□□□□ 0.46
SmoP56726 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.9■□□□□ 0.46
SmoP56726 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.9■□□□□ 0.46
SmoP56726 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SmoP56726 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SmoP56726 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SmoP56726 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SmoP56726 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SmoP56726 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
SmoP56726 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SmoP56726 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SmoP56726 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SmoP56726 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SmoP56726 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SmoP56726 Gm37055-201ENSMUST00000191866 133 ntBASIC17.89■□□□□ 0.45
SmoP56726 Gm29791-202ENSMUST00000207888 369 ntBASIC17.89■□□□□ 0.45
SmoP56726 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SmoP56726 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SmoP56726 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SmoP56726 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SmoP56726 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SmoP56726 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SmoP56726 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SmoP56726 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.89■□□□□ 0.45
SmoP56726 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SmoP56726 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SmoP56726 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SmoP56726 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SmoP56726 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SmoP56726 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SmoP56726 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SmoP56726 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SmoP56726 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.88■□□□□ 0.45
SmoP56726 Gm13401-201ENSMUST00000117074 291 ntBASIC17.88■□□□□ 0.45
SmoP56726 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SmoP56726 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SmoP56726 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SmoP56726 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SmoP56726 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SmoP56726 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SmoP56726 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SmoP56726 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SmoP56726 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SmoP56726 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SmoP56726 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SmoP56726 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SmoP56726 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms