Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lim2P56563 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.81■□□□□ 0.44
Lim2P56563 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lim2P56563 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lim2P56563 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.81■□□□□ 0.44
Lim2P56563 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lim2P56563 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.81■□□□□ 0.44
Lim2P56563 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lim2P56563 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lim2P56563 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lim2P56563 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lim2P56563 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lim2P56563 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Lim2P56563 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lim2P56563 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lim2P56563 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lim2P56563 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.8■□□□□ 0.44
Lim2P56563 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.8■□□□□ 0.44
Lim2P56563 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.8■□□□□ 0.44
Lim2P56563 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Lim2P56563 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lim2P56563 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.8■□□□□ 0.44
Lim2P56563 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.79■□□□□ 0.44
Lim2P56563 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.79■□□□□ 0.44
Lim2P56563 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lim2P56563 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lim2P56563 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lim2P56563 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.79■□□□□ 0.44
Lim2P56563 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lim2P56563 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lim2P56563 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lim2P56563 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lim2P56563 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lim2P56563 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lim2P56563 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lim2P56563 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
Lim2P56563 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lim2P56563 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lim2P56563 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lim2P56563 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.78■□□□□ 0.44
Lim2P56563 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lim2P56563 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.78■□□□□ 0.44
Lim2P56563 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lim2P56563 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lim2P56563 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.78■□□□□ 0.44
Lim2P56563 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lim2P56563 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lim2P56563 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lim2P56563 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
Lim2P56563 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lim2P56563 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lim2P56563 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lim2P56563 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.77■□□□□ 0.44
Lim2P56563 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lim2P56563 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lim2P56563 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.77■□□□□ 0.44
Lim2P56563 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lim2P56563 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lim2P56563 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.77■□□□□ 0.44
Lim2P56563 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Lim2P56563 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lim2P56563 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lim2P56563 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lim2P56563 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Lim2P56563 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.77■□□□□ 0.43
Lim2P56563 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lim2P56563 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.77■□□□□ 0.43
Lim2P56563 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lim2P56563 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lim2P56563 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lim2P56563 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lim2P56563 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lim2P56563 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lim2P56563 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.76■□□□□ 0.43
Lim2P56563 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.76■□□□□ 0.43
Lim2P56563 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lim2P56563 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.76■□□□□ 0.43
Lim2P56563 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.76■□□□□ 0.43
Lim2P56563 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.76■□□□□ 0.43
Lim2P56563 Gm10138-203ENSMUST00000206952 366 ntBASIC17.76■□□□□ 0.43
Lim2P56563 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.76■□□□□ 0.43
Lim2P56563 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lim2P56563 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lim2P56563 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lim2P56563 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lim2P56563 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lim2P56563 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lim2P56563 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lim2P56563 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lim2P56563 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lim2P56563 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.75■□□□□ 0.43
Lim2P56563 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lim2P56563 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Lim2P56563 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lim2P56563 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lim2P56563 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lim2P56563 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lim2P56563 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lim2P56563 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lim2P56563 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms