Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Msh6P54276 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Msh6P54276 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Msh6P54276 Gm43353-201ENSMUST00000199224 1295 ntBASIC22.69■■□□□ 1.22
Msh6P54276 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Msh6P54276 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Msh6P54276 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Msh6P54276 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Msh6P54276 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Msh6P54276 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Msh6P54276 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Msh6P54276 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC22.68■■□□□ 1.22
Msh6P54276 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Msh6P54276 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Msh6P54276 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Msh6P54276 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Msh6P54276 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Msh6P54276 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Msh6P54276 Gm12085-201ENSMUST00000119263 940 ntBASIC22.68■■□□□ 1.22
Msh6P54276 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC22.68■■□□□ 1.22
Msh6P54276 Gm38027-201ENSMUST00000192315 235 ntBASIC22.68■■□□□ 1.22
Msh6P54276 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Msh6P54276 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
Msh6P54276 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC22.68■■□□□ 1.22
Msh6P54276 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Msh6P54276 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Msh6P54276 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Msh6P54276 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Msh6P54276 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Msh6P54276 Gm37820-201ENSMUST00000194021 2147 ntBASIC22.67■■□□□ 1.22
Msh6P54276 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Msh6P54276 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Msh6P54276 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Msh6P54276 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Msh6P54276 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Msh6P54276 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Msh6P54276 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Msh6P54276 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Msh6P54276 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Msh6P54276 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Msh6P54276 Gm13401-201ENSMUST00000117074 291 ntBASIC22.66■■□□□ 1.22
Msh6P54276 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Msh6P54276 AC134329.2-201ENSMUST00000217897 428 ntBASIC22.66■■□□□ 1.22
Msh6P54276 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC22.66■■□□□ 1.22
Msh6P54276 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Msh6P54276 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Msh6P54276 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Msh6P54276 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Msh6P54276 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC22.66■■□□□ 1.22
Msh6P54276 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Msh6P54276 Mir5130-201ENSMUST00000175160 84 ntBASIC22.65■■□□□ 1.22
Msh6P54276 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Msh6P54276 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Msh6P54276 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Msh6P54276 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Msh6P54276 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Msh6P54276 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Msh6P54276 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Msh6P54276 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
Msh6P54276 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Msh6P54276 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Msh6P54276 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Msh6P54276 Ank2-226ENSMUST00000189368 339 ntBASIC22.64■■□□□ 1.22
Msh6P54276 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC22.64■■□□□ 1.22
Msh6P54276 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Msh6P54276 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Msh6P54276 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Msh6P54276 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Msh6P54276 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Msh6P54276 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Msh6P54276 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Msh6P54276 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Msh6P54276 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Msh6P54276 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Msh6P54276 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Msh6P54276 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Msh6P54276 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Msh6P54276 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Msh6P54276 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC22.63■■□□□ 1.21
Msh6P54276 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Msh6P54276 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Msh6P54276 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Msh6P54276 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Msh6P54276 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Msh6P54276 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Msh6P54276 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Msh6P54276 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Msh6P54276 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Msh6P54276 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC22.63■■□□□ 1.21
Msh6P54276 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Msh6P54276 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Msh6P54276 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Msh6P54276 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Msh6P54276 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Msh6P54276 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Msh6P54276 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Msh6P54276 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Msh6P54276 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Msh6P54276 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Msh6P54276 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms