Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Atxn1P54254 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Atxn1P54254 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn1P54254 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.66■□□□□ 0.42
Atxn1P54254 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn1P54254 Gm45058-201ENSMUST00000205810 766 ntBASIC17.66■□□□□ 0.42
Atxn1P54254 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn1P54254 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn1P54254 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Atxn1P54254 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn1P54254 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn1P54254 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.66■□□□□ 0.42
Atxn1P54254 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn1P54254 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn1P54254 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn1P54254 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.66■□□□□ 0.42
Atxn1P54254 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn1P54254 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Atxn1P54254 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atxn1P54254 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atxn1P54254 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atxn1P54254 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atxn1P54254 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atxn1P54254 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Atxn1P54254 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atxn1P54254 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atxn1P54254 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atxn1P54254 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Atxn1P54254 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atxn1P54254 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.65■□□□□ 0.42
Atxn1P54254 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.65■□□□□ 0.42
Atxn1P54254 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atxn1P54254 Gm37292-201ENSMUST00000192062 758 ntBASIC17.65■□□□□ 0.42
Atxn1P54254 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.65■□□□□ 0.42
Atxn1P54254 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Atxn1P54254 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atxn1P54254 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atxn1P54254 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Atxn1P54254 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atxn1P54254 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atxn1P54254 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.65■□□□□ 0.42
Atxn1P54254 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atxn1P54254 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Atxn1P54254 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Atxn1P54254 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Atxn1P54254 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atxn1P54254 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atxn1P54254 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atxn1P54254 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Atxn1P54254 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atxn1P54254 Gm7284-201ENSMUST00000131667 944 ntBASIC17.64■□□□□ 0.41
Atxn1P54254 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atxn1P54254 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atxn1P54254 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atxn1P54254 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atxn1P54254 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atxn1P54254 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atxn1P54254 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atxn1P54254 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Atxn1P54254 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Atxn1P54254 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Atxn1P54254 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.63■□□□□ 0.41
Atxn1P54254 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.63■□□□□ 0.41
Atxn1P54254 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Atxn1P54254 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.63■□□□□ 0.41
Atxn1P54254 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 Gm44771-201ENSMUST00000206975 626 ntBASIC17.63■□□□□ 0.41
Atxn1P54254 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.63■□□□□ 0.41
Atxn1P54254 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Atxn1P54254 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 BC021767-201ENSMUST00000126387 1716 ntBASIC17.63■□□□□ 0.41
Atxn1P54254 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Atxn1P54254 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atxn1P54254 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Atxn1P54254 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atxn1P54254 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atxn1P54254 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Atxn1P54254 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atxn1P54254 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atxn1P54254 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atxn1P54254 Gm15375-201ENSMUST00000119510 849 ntBASIC17.62■□□□□ 0.41
Atxn1P54254 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atxn1P54254 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.62■□□□□ 0.41
Atxn1P54254 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Atxn1P54254 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atxn1P54254 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms