Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sox3P53784 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox3P53784 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox3P53784 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Sox3P53784 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.03■□□□□ 0.32
Sox3P53784 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.03■□□□□ 0.32
Sox3P53784 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox3P53784 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox3P53784 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox3P53784 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.03■□□□□ 0.32
Sox3P53784 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox3P53784 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox3P53784 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.03■□□□□ 0.32
Sox3P53784 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox3P53784 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox3P53784 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox3P53784 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox3P53784 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox3P53784 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.02■□□□□ 0.32
Sox3P53784 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.02■□□□□ 0.32
Sox3P53784 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.02■□□□□ 0.32
Sox3P53784 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox3P53784 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.02■□□□□ 0.32
Sox3P53784 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.02■□□□□ 0.32
Sox3P53784 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox3P53784 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sox3P53784 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox3P53784 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox3P53784 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox3P53784 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox3P53784 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox3P53784 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox3P53784 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox3P53784 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox3P53784 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.01■□□□□ 0.31
Sox3P53784 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox3P53784 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.01■□□□□ 0.31
Sox3P53784 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.01■□□□□ 0.31
Sox3P53784 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox3P53784 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Sox3P53784 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox3P53784 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox3P53784 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sox3P53784 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sox3P53784 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox3P53784 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox3P53784 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox3P53784 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox3P53784 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox3P53784 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox3P53784 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox3P53784 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox3P53784 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17■□□□□ 0.31
Sox3P53784 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox3P53784 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sox3P53784 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Sox3P53784 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17■□□□□ 0.31
Sox3P53784 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17■□□□□ 0.31
Sox3P53784 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox3P53784 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox3P53784 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sox3P53784 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox3P53784 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox3P53784 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sox3P53784 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox3P53784 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox3P53784 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Sox3P53784 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Sox3P53784 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Sox3P53784 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox3P53784 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox3P53784 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox3P53784 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox3P53784 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox3P53784 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox3P53784 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox3P53784 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Sox3P53784 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox3P53784 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox3P53784 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox3P53784 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox3P53784 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox3P53784 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox3P53784 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox3P53784 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sox3P53784 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox3P53784 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Sox3P53784 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox3P53784 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.98■□□□□ 0.31
Sox3P53784 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox3P53784 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.98■□□□□ 0.31
Sox3P53784 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox3P53784 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox3P53784 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.98■□□□□ 0.31
Sox3P53784 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox3P53784 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox3P53784 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.98■□□□□ 0.31
Sox3P53784 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox3P53784 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox3P53784 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms