Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.22■□□□□ 0.51
Sox1P53783 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sox1P53783 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Sox1P53783 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.22■□□□□ 0.51
Sox1P53783 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sox1P53783 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.22■□□□□ 0.51
Sox1P53783 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sox1P53783 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sox1P53783 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sox1P53783 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox1P53783 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sox1P53783 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.21■□□□□ 0.51
Sox1P53783 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.21■□□□□ 0.51
Sox1P53783 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.21■□□□□ 0.51
Sox1P53783 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.21■□□□□ 0.51
Sox1P53783 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.21■□□□□ 0.51
Sox1P53783 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.21■□□□□ 0.51
Sox1P53783 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Sox1P53783 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox1P53783 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.21■□□□□ 0.51
Sox1P53783 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox1P53783 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox1P53783 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sox1P53783 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sox1P53783 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sox1P53783 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sox1P53783 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sox1P53783 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.2■□□□□ 0.5
Sox1P53783 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.2■□□□□ 0.5
Sox1P53783 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sox1P53783 Gm2213-201ENSMUST00000197485 688 ntBASIC18.2■□□□□ 0.5
Sox1P53783 Gm2651-201ENSMUST00000203560 838 ntBASIC18.2■□□□□ 0.5
Sox1P53783 Gm4974-201ENSMUST00000209974 875 ntBASIC18.2■□□□□ 0.5
Sox1P53783 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.2■□□□□ 0.5
Sox1P53783 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sox1P53783 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.2■□□□□ 0.5
Sox1P53783 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.19■□□□□ 0.5
Sox1P53783 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sox1P53783 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox1P53783 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox1P53783 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox1P53783 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox1P53783 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox1P53783 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.19■□□□□ 0.5
Sox1P53783 Gm8000-201ENSMUST00000188378 592 ntBASIC18.19■□□□□ 0.5
Sox1P53783 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox1P53783 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sox1P53783 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox1P53783 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sox1P53783 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox1P53783 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox1P53783 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.18■□□□□ 0.5
Sox1P53783 Gm27702-201ENSMUST00000184512 56 ntBASIC18.18■□□□□ 0.5
Sox1P53783 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.18■□□□□ 0.5
Sox1P53783 Gm45328-201ENSMUST00000210942 917 ntBASIC18.18■□□□□ 0.5
Sox1P53783 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.18■□□□□ 0.5
Sox1P53783 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.18■□□□□ 0.5
Sox1P53783 Gm10566-201ENSMUST00000086739 996 ntBASIC18.18■□□□□ 0.5
Sox1P53783 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sox1P53783 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sox1P53783 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox1P53783 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox1P53783 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sox1P53783 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox1P53783 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sox1P53783 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox1P53783 Gm10052-201ENSMUST00000168019 960 ntBASIC18.17■□□□□ 0.5
Sox1P53783 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox1P53783 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox1P53783 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox1P53783 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox1P53783 Gm7729-201ENSMUST00000050143 801 ntBASIC18.17■□□□□ 0.5
Sox1P53783 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.17■□□□□ 0.5
Sox1P53783 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sox1P53783 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Sox1P53783 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sox1P53783 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox1P53783 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox1P53783 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox1P53783 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.16■□□□□ 0.5
Sox1P53783 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sox1P53783 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox1P53783 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sox1P53783 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Sox1P53783 Gm1401-201ENSMUST00000122048 772 ntBASIC18.16■□□□□ 0.5
Sox1P53783 Gm12895-201ENSMUST00000122214 226 ntBASIC18.16■□□□□ 0.5
Sox1P53783 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.16■□□□□ 0.5
Sox1P53783 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sox1P53783 Gm26039-201ENSMUST00000158152 144 ntBASIC18.16■□□□□ 0.5
Sox1P53783 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sox1P53783 Gm10576-201ENSMUST00000191927 825 ntBASIC18.16■□□□□ 0.5
Sox1P53783 Gm43575-201ENSMUST00000196420 516 ntBASIC18.16■□□□□ 0.5
Sox1P53783 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.16■□□□□ 0.5
Sox1P53783 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sox1P53783 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.16■□□□□ 0.5
Sox1P53783 Gm5186-201ENSMUST00000218781 920 ntBASIC18.16■□□□□ 0.5
Sox1P53783 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sox1P53783 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sox1P53783 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sox1P53783 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms