Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ercc3P49135 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ercc3P49135 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.09■□□□□ 0.97
Ercc3P49135 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ercc3P49135 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ercc3P49135 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ercc3P49135 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ercc3P49135 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ercc3P49135 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ercc3P49135 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ercc3P49135 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.08■□□□□ 0.97
Ercc3P49135 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.08■□□□□ 0.97
Ercc3P49135 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Ercc3P49135 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.08■□□□□ 0.97
Ercc3P49135 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ercc3P49135 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ercc3P49135 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.08■□□□□ 0.96
Ercc3P49135 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ercc3P49135 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Ercc3P49135 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ercc3P49135 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ercc3P49135 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.07■□□□□ 0.96
Ercc3P49135 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ercc3P49135 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.07■□□□□ 0.96
Ercc3P49135 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ercc3P49135 Gm42545-201ENSMUST00000202755 922 ntBASIC21.07■□□□□ 0.96
Ercc3P49135 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.07■□□□□ 0.96
Ercc3P49135 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Ercc3P49135 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ercc3P49135 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ercc3P49135 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ercc3P49135 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ercc3P49135 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ercc3P49135 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ercc3P49135 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ercc3P49135 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.06■□□□□ 0.96
Ercc3P49135 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Ercc3P49135 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ercc3P49135 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Ercc3P49135 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ercc3P49135 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ercc3P49135 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ercc3P49135 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ercc3P49135 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ercc3P49135 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ercc3P49135 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.05■□□□□ 0.96
Ercc3P49135 Gm18666-201ENSMUST00000190039 958 ntBASIC21.05■□□□□ 0.96
Ercc3P49135 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.05■□□□□ 0.96
Ercc3P49135 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ercc3P49135 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.04■□□□□ 0.96
Ercc3P49135 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc3P49135 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ercc3P49135 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ercc3P49135 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc3P49135 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc3P49135 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc3P49135 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc3P49135 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc3P49135 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc3P49135 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ercc3P49135 Gm15375-201ENSMUST00000119510 849 ntBASIC21.04■□□□□ 0.96
Ercc3P49135 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc3P49135 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc3P49135 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc3P49135 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.04■□□□□ 0.96
Ercc3P49135 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc3P49135 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc3P49135 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc3P49135 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc3P49135 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc3P49135 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ercc3P49135 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ercc3P49135 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.03■□□□□ 0.96
Ercc3P49135 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ercc3P49135 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ercc3P49135 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ercc3P49135 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ercc3P49135 Mir2861-201ENSMUST00000175539 82 ntBASIC21.03■□□□□ 0.96
Ercc3P49135 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.03■□□□□ 0.96
Ercc3P49135 Gm10138-203ENSMUST00000206952 366 ntBASIC21.03■□□□□ 0.96
Ercc3P49135 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ercc3P49135 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ercc3P49135 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ercc3P49135 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ercc3P49135 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ercc3P49135 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ercc3P49135 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc3P49135 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.02■□□□□ 0.96
Ercc3P49135 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc3P49135 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc3P49135 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ercc3P49135 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc3P49135 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.02■□□□□ 0.96
Ercc3P49135 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.02■□□□□ 0.96
Ercc3P49135 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc3P49135 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc3P49135 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc3P49135 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc3P49135 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ercc3P49135 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms