Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.66■□□□□ 0.58
Rfx2P48379 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx2P48379 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rfx2P48379 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx2P48379 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx2P48379 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx2P48379 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rfx2P48379 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx2P48379 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx2P48379 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx2P48379 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx2P48379 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.65■□□□□ 0.58
Rfx2P48379 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.65■□□□□ 0.58
Rfx2P48379 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Rfx2P48379 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx2P48379 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx2P48379 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx2P48379 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx2P48379 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.65■□□□□ 0.58
Rfx2P48379 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx2P48379 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx2P48379 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx2P48379 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx2P48379 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx2P48379 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx2P48379 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx2P48379 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx2P48379 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx2P48379 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rfx2P48379 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.65■□□□□ 0.58
Rfx2P48379 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx2P48379 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rfx2P48379 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Rfx2P48379 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rfx2P48379 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx2P48379 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx2P48379 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx2P48379 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx2P48379 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx2P48379 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx2P48379 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx2P48379 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.64■□□□□ 0.57
Rfx2P48379 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx2P48379 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx2P48379 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx2P48379 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx2P48379 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx2P48379 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx2P48379 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.64■□□□□ 0.57
Rfx2P48379 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx2P48379 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx2P48379 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.63■□□□□ 0.57
Rfx2P48379 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx2P48379 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rfx2P48379 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.63■□□□□ 0.57
Rfx2P48379 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx2P48379 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx2P48379 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Rfx2P48379 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx2P48379 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx2P48379 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.63■□□□□ 0.57
Rfx2P48379 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx2P48379 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx2P48379 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx2P48379 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Rfx2P48379 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rfx2P48379 Gm10138-203ENSMUST00000206952 366 ntBASIC18.62■□□□□ 0.57
Rfx2P48379 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Rfx2P48379 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.62■□□□□ 0.57
Rfx2P48379 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rfx2P48379 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx2P48379 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx2P48379 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Rfx2P48379 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rfx2P48379 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx2P48379 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx2P48379 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx2P48379 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx2P48379 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx2P48379 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx2P48379 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx2P48379 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx2P48379 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx2P48379 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx2P48379 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.61■□□□□ 0.57
Rfx2P48379 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.61■□□□□ 0.57
Rfx2P48379 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx2P48379 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rfx2P48379 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx2P48379 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rfx2P48379 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx2P48379 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx2P48379 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx2P48379 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rfx2P48379 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx2P48379 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx2P48379 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.6■□□□□ 0.57
Rfx2P48379 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.6■□□□□ 0.57
Rfx2P48379 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rfx2P48379 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms