Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Mir2861-201ENSMUST00000175539 82 ntBASIC16.85■□□□□ 0.29
Nkx2-6P43688 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Gm30025-201ENSMUST00000218555 728 ntBASIC16.85■□□□□ 0.29
Nkx2-6P43688 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.85■□□□□ 0.29
Nkx2-6P43688 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-6P43688 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-6P43688 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.84■□□□□ 0.29
Nkx2-6P43688 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-6P43688 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nkx2-6P43688 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Nkx2-6P43688 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.83■□□□□ 0.28
Nkx2-6P43688 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-6P43688 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-6P43688 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-6P43688 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-6P43688 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-6P43688 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-6P43688 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-6P43688 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-6P43688 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-6P43688 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-6P43688 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-6P43688 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-6P43688 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-6P43688 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-6P43688 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-6P43688 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-6P43688 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-6P43688 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-6P43688 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.82■□□□□ 0.28
Nkx2-6P43688 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.82■□□□□ 0.28
Nkx2-6P43688 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nkx2-6P43688 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-6P43688 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
Nkx2-6P43688 Gm13559-201ENSMUST00000120476 863 ntBASIC16.82■□□□□ 0.28
Nkx2-6P43688 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.82■□□□□ 0.28
Nkx2-6P43688 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.82■□□□□ 0.28
Nkx2-6P43688 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-6P43688 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-6P43688 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-6P43688 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-6P43688 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Nkx2-6P43688 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-6P43688 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-6P43688 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-6P43688 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Nkx2-6P43688 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-6P43688 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.81■□□□□ 0.28
Nkx2-6P43688 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-6P43688 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-6P43688 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-6P43688 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-6P43688 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-6P43688 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-6P43688 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-6P43688 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-6P43688 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.81■□□□□ 0.28
Nkx2-6P43688 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Nkx2-6P43688 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-6P43688 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-6P43688 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-6P43688 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms