Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.16■□□□□ 0.66
HttP42859 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HttP42859 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HttP42859 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.15■□□□□ 0.66
HttP42859 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HttP42859 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.15■□□□□ 0.66
HttP42859 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.15■□□□□ 0.66
HttP42859 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.15■□□□□ 0.66
HttP42859 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HttP42859 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HttP42859 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HttP42859 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC19.15■□□□□ 0.66
HttP42859 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.15■□□□□ 0.66
HttP42859 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.14■□□□□ 0.66
HttP42859 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HttP42859 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HttP42859 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HttP42859 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HttP42859 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HttP42859 Gm10418-201ENSMUST00000100943 576 ntBASIC19.14■□□□□ 0.65
HttP42859 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.14■□□□□ 0.65
HttP42859 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.14■□□□□ 0.65
HttP42859 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HttP42859 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HttP42859 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HttP42859 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HttP42859 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HttP42859 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.14■□□□□ 0.65
HttP42859 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.14■□□□□ 0.65
HttP42859 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HttP42859 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HttP42859 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HttP42859 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HttP42859 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HttP42859 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HttP42859 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HttP42859 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC19.13■□□□□ 0.65
HttP42859 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HttP42859 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
HttP42859 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HttP42859 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HttP42859 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HttP42859 Il3ra-202ENSMUST00000223589 738 ntBASIC19.13■□□□□ 0.65
HttP42859 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HttP42859 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HttP42859 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HttP42859 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HttP42859 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HttP42859 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.12■□□□□ 0.65
HttP42859 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.12■□□□□ 0.65
HttP42859 Auts2-212ENSMUST00000178555 309 ntBASIC19.12■□□□□ 0.65
HttP42859 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.12■□□□□ 0.65
HttP42859 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.12■□□□□ 0.65
HttP42859 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HttP42859 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HttP42859 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HttP42859 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HttP42859 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HttP42859 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HttP42859 Gm11452-201ENSMUST00000122376 690 ntBASIC19.11■□□□□ 0.65
HttP42859 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
HttP42859 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
HttP42859 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HttP42859 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.11■□□□□ 0.65
HttP42859 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HttP42859 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.1■□□□□ 0.65
HttP42859 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HttP42859 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.1■□□□□ 0.65
HttP42859 Gm26039-201ENSMUST00000158152 144 ntBASIC19.1■□□□□ 0.65
HttP42859 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.1■□□□□ 0.65
HttP42859 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HttP42859 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HttP42859 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HttP42859 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.1■□□□□ 0.65
HttP42859 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HttP42859 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HttP42859 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HttP42859 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HttP42859 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HttP42859 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.09■□□□□ 0.65
HttP42859 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HttP42859 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HttP42859 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HttP42859 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HttP42859 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HttP42859 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HttP42859 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.09■□□□□ 0.65
HttP42859 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.09■□□□□ 0.65
HttP42859 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HttP42859 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HttP42859 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HttP42859 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
HttP42859 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HttP42859 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HttP42859 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HttP42859 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HttP42859 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.08■□□□□ 0.64
HttP42859 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HttP42859 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HttP42859 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms