Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd9P40240 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd9P40240 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd9P40240 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd9P40240 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.6■□□□□ 0.41
Cd9P40240 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd9P40240 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd9P40240 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd9P40240 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.59■□□□□ 0.41
Cd9P40240 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd9P40240 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd9P40240 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.59■□□□□ 0.41
Cd9P40240 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Cd9P40240 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cd9P40240 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.59■□□□□ 0.41
Cd9P40240 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd9P40240 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd9P40240 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd9P40240 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd9P40240 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd9P40240 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd9P40240 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd9P40240 Gm13158-201ENSMUST00000122007 736 ntBASIC17.58■□□□□ 0.4
Cd9P40240 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cd9P40240 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.58■□□□□ 0.4
Cd9P40240 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd9P40240 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cd9P40240 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cd9P40240 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.58■□□□□ 0.4
Cd9P40240 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.58■□□□□ 0.4
Cd9P40240 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd9P40240 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd9P40240 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd9P40240 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.57■□□□□ 0.4
Cd9P40240 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd9P40240 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd9P40240 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd9P40240 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.57■□□□□ 0.4
Cd9P40240 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd9P40240 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cd9P40240 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd9P40240 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.57■□□□□ 0.4
Cd9P40240 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.57■□□□□ 0.4
Cd9P40240 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd9P40240 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.56■□□□□ 0.4
Cd9P40240 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd9P40240 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cd9P40240 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cd9P40240 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Cd9P40240 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd9P40240 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd9P40240 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd9P40240 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd9P40240 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cd9P40240 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.56■□□□□ 0.4
Cd9P40240 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd9P40240 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd9P40240 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd9P40240 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd9P40240 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd9P40240 Gm13401-201ENSMUST00000117074 291 ntBASIC17.55■□□□□ 0.4
Cd9P40240 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd9P40240 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd9P40240 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd9P40240 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd9P40240 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd9P40240 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd9P40240 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.54■□□□□ 0.4
Cd9P40240 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cd9P40240 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cd9P40240 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cd9P40240 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cd9P40240 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd9P40240 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd9P40240 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd9P40240 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd9P40240 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd9P40240 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd9P40240 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd9P40240 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd9P40240 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd9P40240 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd9P40240 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd9P40240 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd9P40240 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd9P40240 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd9P40240 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd9P40240 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.53■□□□□ 0.4
Cd9P40240 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.53■□□□□ 0.4
Cd9P40240 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd9P40240 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd9P40240 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cd9P40240 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd9P40240 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.53■□□□□ 0.4
Cd9P40240 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd9P40240 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd9P40240 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd9P40240 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd9P40240 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd9P40240 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms