Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.94■□□□□ 0.46
Fen1P39749 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.94■□□□□ 0.46
Fen1P39749 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Fen1P39749 Gm18284-201ENSMUST00000172604 624 ntBASIC17.94■□□□□ 0.46
Fen1P39749 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Fen1P39749 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Fen1P39749 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Fen1P39749 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.94■□□□□ 0.46
Fen1P39749 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Fen1P39749 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Fen1P39749 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Fen1P39749 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Fen1P39749 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.94■□□□□ 0.46
Fen1P39749 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Fen1P39749 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Fen1P39749 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Fen1P39749 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fen1P39749 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fen1P39749 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Fen1P39749 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Fen1P39749 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fen1P39749 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fen1P39749 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.93■□□□□ 0.46
Fen1P39749 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fen1P39749 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fen1P39749 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fen1P39749 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fen1P39749 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Fen1P39749 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fen1P39749 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.93■□□□□ 0.46
Fen1P39749 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fen1P39749 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Fen1P39749 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fen1P39749 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.93■□□□□ 0.46
Fen1P39749 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fen1P39749 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Fen1P39749 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Fen1P39749 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Fen1P39749 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Fen1P39749 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Fen1P39749 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Fen1P39749 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.92■□□□□ 0.46
Fen1P39749 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Fen1P39749 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Fen1P39749 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Fen1P39749 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Fen1P39749 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.92■□□□□ 0.46
Fen1P39749 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.92■□□□□ 0.46
Fen1P39749 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Fen1P39749 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Fen1P39749 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Fen1P39749 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Fen1P39749 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Fen1P39749 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Fen1P39749 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Fen1P39749 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Fen1P39749 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Fen1P39749 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
Fen1P39749 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.91■□□□□ 0.46
Fen1P39749 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Fen1P39749 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Fen1P39749 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Fen1P39749 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Fen1P39749 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Fen1P39749 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Fen1P39749 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Fen1P39749 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fen1P39749 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fen1P39749 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fen1P39749 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Fen1P39749 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fen1P39749 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fen1P39749 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.9■□□□□ 0.46
Fen1P39749 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Fen1P39749 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fen1P39749 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fen1P39749 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fen1P39749 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Fen1P39749 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Fen1P39749 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fen1P39749 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fen1P39749 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fen1P39749 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.89■□□□□ 0.45
Fen1P39749 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.89■□□□□ 0.45
Fen1P39749 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.89■□□□□ 0.45
Fen1P39749 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fen1P39749 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Fen1P39749 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fen1P39749 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fen1P39749 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fen1P39749 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fen1P39749 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Fen1P39749 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Fen1P39749 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Fen1P39749 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fen1P39749 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
Fen1P39749 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fen1P39749 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fen1P39749 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fen1P39749 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms