Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LdlrP35951 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LdlrP35951 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LdlrP35951 Gm13534-201ENSMUST00000121169 513 ntBASIC17.72■□□□□ 0.43
LdlrP35951 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LdlrP35951 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LdlrP35951 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.72■□□□□ 0.43
LdlrP35951 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LdlrP35951 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LdlrP35951 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LdlrP35951 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.72■□□□□ 0.43
LdlrP35951 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.72■□□□□ 0.43
LdlrP35951 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
LdlrP35951 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LdlrP35951 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LdlrP35951 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LdlrP35951 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LdlrP35951 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LdlrP35951 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LdlrP35951 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LdlrP35951 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LdlrP35951 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.71■□□□□ 0.43
LdlrP35951 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LdlrP35951 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.71■□□□□ 0.43
LdlrP35951 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LdlrP35951 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LdlrP35951 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LdlrP35951 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LdlrP35951 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.71■□□□□ 0.43
LdlrP35951 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LdlrP35951 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LdlrP35951 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LdlrP35951 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LdlrP35951 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LdlrP35951 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.7■□□□□ 0.42
LdlrP35951 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LdlrP35951 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.7■□□□□ 0.42
LdlrP35951 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LdlrP35951 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.7■□□□□ 0.42
LdlrP35951 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LdlrP35951 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LdlrP35951 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LdlrP35951 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LdlrP35951 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LdlrP35951 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LdlrP35951 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LdlrP35951 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LdlrP35951 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LdlrP35951 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LdlrP35951 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
LdlrP35951 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LdlrP35951 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LdlrP35951 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LdlrP35951 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LdlrP35951 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LdlrP35951 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LdlrP35951 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LdlrP35951 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LdlrP35951 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LdlrP35951 Gm7290-201ENSMUST00000104990 617 ntBASIC17.69■□□□□ 0.42
LdlrP35951 Gm13148-201ENSMUST00000118892 745 ntBASIC17.69■□□□□ 0.42
LdlrP35951 Gm12918-201ENSMUST00000120234 636 ntBASIC17.69■□□□□ 0.42
LdlrP35951 Gm15710-201ENSMUST00000121821 636 ntBASIC17.69■□□□□ 0.42
LdlrP35951 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.69■□□□□ 0.42
LdlrP35951 Gm5075-201ENSMUST00000196916 622 ntBASIC17.69■□□□□ 0.42
LdlrP35951 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.69■□□□□ 0.42
LdlrP35951 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.69■□□□□ 0.42
LdlrP35951 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LdlrP35951 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LdlrP35951 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LdlrP35951 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.69■□□□□ 0.42
LdlrP35951 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LdlrP35951 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LdlrP35951 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
LdlrP35951 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.69■□□□□ 0.42
LdlrP35951 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LdlrP35951 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LdlrP35951 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LdlrP35951 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LdlrP35951 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LdlrP35951 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.68■□□□□ 0.42
LdlrP35951 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LdlrP35951 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.68■□□□□ 0.42
LdlrP35951 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LdlrP35951 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.67■□□□□ 0.42
LdlrP35951 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LdlrP35951 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.67■□□□□ 0.42
LdlrP35951 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.67■□□□□ 0.42
LdlrP35951 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
LdlrP35951 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LdlrP35951 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms